RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 KLF16Q9BXK1 252 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 RNF38Q9H0F5 515 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 EPN3Q9H201 632 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 GLOD4Q9HC38 313 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 IRAK3Q9Y616 596 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 C2orf78A6NCI8 922 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 RAMP2O60895 175 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 ANXA9O76027 345 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 ALDH1A2O94788 518 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 ADH1AP07327 375 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 KRT15P19012 456 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 TNK2Q07912 1038 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 PABPC1LQ4VXU2 614 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 NAPEPLDQ6IQ20 393 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 LILRA6Q6PI73 481 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 LINC00523Q86TU6 105 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 LGI2Q8N0V4 545 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 OR52K1Q8NGK4 314 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 MZB1Q8WU39 189 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 MRRFQ96E11 262 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 MYEOVQ96EZ4 313 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 OXNAD1Q96HP4 312 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZNF334Q9HCZ1 680 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 INTS9Q9NV88 658 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 RBM22Q9NW64 420 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 SYBUQ9NX95 663 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 MOCS1Q9NZB8 636 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZNF180Q9UJW8 692 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 IKBKGQ9Y6K9 419 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 MTCL1Q9Y4B5 1905 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 FAM159BA6NKW6 160 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CXCL14O95715 111 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 HLA-DQB2P05538 268 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 INHBAP08476 426 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 OR1E1P30953 314 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CORO1AP31146 461 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CA8P35219 290 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 RENBPP51606 427 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC18A1P54219 525 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 POLD3Q15054 466 aaPredicted RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 RABGAP1LQ5R372 815 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CASC4Q6P4E1 433 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 OTOP3Q7RTS5 596 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC26A11Q86WA9 606 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 LRRC6Q86X45 466 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 DENND1CQ8IV53 801 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 KLHL5Q96PQ7 755 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 TRABDQ9H4I3 376 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 BFARQ9NZS9 450 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 IQANK1A0A1B0GTG1 560 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 PRPF4O43172 522 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 PIAS1O75925 651 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 LATS1O95835 1130 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 OLFM2O95897 454 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 KLKB1P03952 638 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 NPY2RP49146 381 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CDH4P55283 916 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CRADDP78560 199 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 PPARDQ03181 441 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 OLIG2Q13516 323 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 SERINC3Q13530 473 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CCDC149Q6ZUS6 474 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 TMC7Q7Z402 723 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CIR1Q86X95 450 aaPredicted RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 C7orf61Q8IZ16 206 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 TTC17Q96AE7 1141 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 TRIM56Q9BRZ2 755 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 SP110Q9HB58 689 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 PIH1D1Q9NWS0 290 aaKnown RBP11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 STOML2Q9UJZ1 356 aa11.67□□□□□ -0.54
SMARCAL1-203ENST00000392128 J3KR12 359 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 TLL1O43897 1013 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 USP12O75317 370 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 SPATA31D3P0C874 917 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 BMPR1AP36894 532 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 GEMP55040 296 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 IL10RBQ08334 325 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 CDH17Q12864 832 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 CRYMQ14894 314 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 ADGRF1Q5T601 910 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZNF449Q6P9G9 518 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 RFWD3Q6PCD5 774 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 TRMT10BQ6PF06 316 aaKnown RBP11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 SPATA31D4Q6ZUB0 917 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 TEX26Q8N6G2 289 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 DNAAF3Q8N9W5 541 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 SMC6Q96SB8 1091 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 SMYD2Q9NRG4 433 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 GKN1Q9NS71 199 aa11.66□□□□□ -0.54
SMARCAL1-203ENST00000392128 SAMD15Q9P1V8 674 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms