RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 TTC12Q9H892 705 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 ACTR5Q9H9F9 607 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 THSD1Q9NS62 852 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TMEM160Q9NX00 188 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 TUBA8Q9NY65 449 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 HSF4Q9ULV5 492 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 BTBD3Q9Y2F9 522 aa4.79□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZMYM2Q9UBW7 1377 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 TRBV5-3A0A0A0MS03 114 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 SH2D7A6NKC9 451 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 FOXO6A8MYZ6 492 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 HOXC11O43248 304 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 NEURL1O76050 574 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 LCKP06239 509 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 HNF1BP35680 557 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 VAMP2P63027 116 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 MAPK7Q13164 816 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 MTX1Q13505 466 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 SEMA3AQ14563 771 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 NAA25Q14CX7 972 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 RBMS2Q15434 407 aaKnown RBP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 ETFDHQ16134 617 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 NFIL3Q16649 462 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 SMTNL2Q2TAL5 461 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 C6orf10Q5SRN2 563 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 TMEM268Q5VZI3 342 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 RETSATQ6NUM9 610 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 AADACL2Q6P093 401 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 TMTC1Q8IUR5 882 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 GHDCQ8N2G8 530 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 PIGOQ8TEQ8 1089 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 IGFBPL1Q8WX77 278 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 CENPIQ92674 756 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 HVCN1Q96D96 273 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 TAOK3Q9H2K8 898 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 HIPK3Q9H422 1215 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 MSRB1Q9NZV6 116 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 PDP2Q9P2J9 529 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 SLC13A4Q9UKG4 626 aa4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.2-201ENST00000390847 TTBK1Q5TCY1 1321 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 OVOL3O00110 214 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 CNOT3O75175 753 aaKnown RBP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 FGBP02675 491 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 HNRNPA1P09651 372 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 CD72P21854 359 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 GJC1P36383 396 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 MTNR1AP48039 350 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 PLCD1P51178 756 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 SSBP2P81877 361 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 TDGQ13569 410 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 PLK5Q496M5 336 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 ENTPD8Q5MY95 495 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 VWA5B1Q5TIE3 1220 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 LVRNQ6Q4G3 990 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 HEATR4Q86WZ0 1026 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 DPP10Q8N608 796 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 CMASQ8NFW8 434 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 C16orf52Q8NHV5 167 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 HTRA1Q92743 480 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 COQ8BQ96D53 544 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 SPRTNQ9H040 489 aaPredicted RBP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 IL21RQ9HBE5 538 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 WASH6PQ9NQA3 447 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 CNOT7Q9UIV1 285 aaKnown RBP4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 GJD2Q9UKL4 321 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 COG5Q9UP83 839 aa4.77□□□□□ -1.65
SNORA40.2-201ENST00000390847 CCDC196A0A1B0GTZ2 297 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 A0A1W2PPC1 479 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 OR6C68A6NDL8 312 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 C17orf100A8MU93 164 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 GUCY1B2O75343 617 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 DDAH2O95865 285 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 TOP3BO95985 862 aaKnown RBP4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 IL1AP01583 271 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 PAX3P23760 479 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 PSMC2P35998 433 aaKnown RBP4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 SLC16A2P36021 539 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 PTPN9P43378 593 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 PIK3CD-AS1Q5SR53 167 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 CCDC70Q6NSX1 233 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 AAGABQ6PD74 315 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 GJB7Q6PEY0 223 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 SLC22A25Q6T423 547 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 LRRC8DQ7L1W4 858 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 ADGRG6Q86SQ4 1221 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 SLC25A41Q8N5S1 370 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 DNAAF1Q8NEP3 725 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 RFWD2Q8NHY2 731 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 FAR1Q8WVX9 515 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 CNOT9Q92600 299 aaKnown RBP4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 TEFMQ96QE5 360 aaKnown RBP4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 FRG2BQ96QU4 278 aa4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 WDR83Q9BRX9 315 aaKnown RBP4.76□□□□□ -1.65
SNORA40.2-201ENST00000390847 TRMOQ9BU70 441 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms