RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 TCP10LQ8TDR4 215 aa25.71■■□□□ 1.71
SHOX2-201ENST00000389589 ARMC5Q96C12 935 aa25.71■■□□□ 1.71
SHOX2-201ENST00000389589 IL22Q9GZX6 179 aa25.71■■□□□ 1.71
SHOX2-201ENST00000389589 FGFR1OP2Q9NVK5 253 aa25.71■■□□□ 1.71
SHOX2-201ENST00000389589 RPS6KL1Q9Y6S9 549 aa25.71■■□□□ 1.71
SHOX2-201ENST00000389589 FOXN2P32314 431 aa25.7■■□□□ 1.71
SHOX2-201ENST00000389589 ITIH4Q14624 930 aa25.7■■□□□ 1.71
SHOX2-201ENST00000389589 LRRC26Q2I0M4 334 aa25.7■■□□□ 1.71
SHOX2-201ENST00000389589 ZNF512Q96ME7 567 aaPredicted RBP25.7■■□□□ 1.71
SHOX2-201ENST00000389589 KLF6Q99612 283 aaPredicted RBP25.7■■□□□ 1.71
SHOX2-201ENST00000389589 ELAC2Q9BQ52 826 aaKnown RBP25.7■■□□□ 1.71
SHOX2-201ENST00000389589 NEBLO76041 1014 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 PYGBP11216 843 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 GEMP55040 296 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 MGAT5Q09328 741 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 OLIG2Q13516 323 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 BTG3Q14201 252 aaPredicted RBP25.7■■□□□ 1.7
SHOX2-201ENST00000389589 KLHDC10Q6PID8 442 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 TMEM135Q86UB9 458 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 PAWRQ96IZ0 340 aaKnown RBP25.7■■□□□ 1.7
SHOX2-201ENST00000389589 RBM22Q9NW64 420 aaKnown RBP eCLIP25.7■■□□□ 1.7
SHOX2-201ENST00000389589 SPG21Q9NZD8 308 aa25.7■■□□□ 1.7
SHOX2-201ENST00000389589 UGT1A9O60656 530 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 USP1O94782 785 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 SEC24AO95486 1093 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 NEK3P51956 506 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 DEFB103AP81534 67 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 DNAJC3Q13217 504 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 ALFQ53S48 1182 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 TFAP2DQ7Z6R9 452 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 IGSF8Q969P0 613 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 GRAMD1AQ96CP6 724 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 UGT1A7Q9HAW7 530 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 UGT1A10Q9HAW8 530 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 UGT1A8Q9HAW9 530 aa25.69■■□□□ 1.7
SHOX2-201ENST00000389589 FAM237BA0A1B0GVD1 139 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 SNX3O60493 162 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 CNTN5O94779 1100 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 ALADP13716 330 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 RENBPP51606 427 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 HNRNPDQ14103 355 aaKnown RBP25.68■■□□□ 1.7
SHOX2-201ENST00000389589 TIFABQ6ZNK6 161 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 CHSY1Q86X52 802 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 CERS2Q96G23 380 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 MYRFLQ96LU7 910 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 RPRD1AQ96P16 312 aaPredicted RBP25.68■■□□□ 1.7
SHOX2-201ENST00000389589 MKS1Q9NXB0 559 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 ZNF840PA6NDX5 716 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 ALDH1A3P47895 512 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 WDR5P61964 334 aaKnown RBP25.68■■□□□ 1.7
SHOX2-201ENST00000389589 IFT88Q13099 833 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 HECTD3Q5T447 861 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 FAM117BQ6P1L5 589 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 DDX53Q86TM3 631 aaKnown RBP25.68■■□□□ 1.7
SHOX2-201ENST00000389589 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.68■■□□□ 1.7
SHOX2-201ENST00000389589 LRRC8CQ8TDW0 803 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 TBL1YQ9BQ87 522 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 NACA2Q9H009 215 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 RETREG1Q9H6L5 497 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 CYP4F11Q9HBI6 524 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 UBP1Q9NZI7 540 aa25.68■■□□□ 1.7
SHOX2-201ENST00000389589 COPEO14579 308 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 KIAA0355O15063 1070 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 HLA-DQB2P05538 268 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 URODP06132 367 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 CSF2RAP15509 400 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 HMGA1P17096 107 aaKnown RBP25.67■■□□□ 1.7
SHOX2-201ENST00000389589 CCNFP41002 786 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 MAPKAPK2P49137 400 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 UNC5BQ8IZJ1 945 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 HMCESQ96FZ2 354 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 VPS11Q9H270 941 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 TRPM5Q9NZQ8 1165 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 GRID1Q9ULK0 1009 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 MRPL42Q9Y6G3 142 aaKnown RBP25.67■■□□□ 1.7
SHOX2-201ENST00000389589 RFPL1O75677 317 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 TACR2P21452 398 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 RAB33AQ14088 237 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 PARP15Q460N3 678 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 CERCAMQ5T4B2 595 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 RASSF3Q86WH2 238 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 ZNF669Q96BR6 464 aaPredicted RBP25.67■■□□□ 1.7
SHOX2-201ENST00000389589 TRMT2BQ96GJ1 504 aaKnown RBP25.67■■□□□ 1.7
SHOX2-201ENST00000389589 ZMYND15Q9H091 742 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 IQCGQ9H095 443 aaKnown RBP25.67■■□□□ 1.7
SHOX2-201ENST00000389589 ZFATQ9P243 1243 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 ZNF212Q9UDV6 495 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 SOX13Q9UN79 622 aa25.67■■□□□ 1.7
SHOX2-201ENST00000389589 MIA3Q5JRA6 1907 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 KIAA1671Q9BY89 1806 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 F5H5T6 163 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 OAS1P00973 400 aaKnown RBP25.66■■□□□ 1.7
SHOX2-201ENST00000389589 ADRA1DP25100 572 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 YBEYP58557 167 aaPredicted RBP25.66■■□□□ 1.7
SHOX2-201ENST00000389589 VEPH1Q14D04 833 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 TAF12Q16514 161 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 C5orf22Q49AR2 442 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 ANKRD20A4Q4UJ75 823 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 PACS1Q6VY07 963 aa25.66■■□□□ 1.7
SHOX2-201ENST00000389589 TMEM199Q8N511 208 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms