RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 USP17L11C9JVI0 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L18D6R9N7 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L22D6RA61 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L17D6RBQ6 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L19D6RCP7 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L20D6RJB6 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 CHMP2AO43633 222 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 TAL1P17542 331 aaPredicted RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 TFE3P19532 575 aaPredicted RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 MLLT3P42568 568 aaPredicted RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 DPP6P42658 865 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 CDK18Q07002 472 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 USP17L24Q0WX57 530 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 CLEC16AQ2KHT3 1053 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 LIN9Q5TKA1 542 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ANGEL2Q5VTE6 544 aaKnown RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 DCUN1D2Q6PH85 259 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ABRAXAS1Q6UWZ7 409 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 LAYNQ6UX15 382 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 KIAA0408Q6ZU52 694 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ACTL9Q8TC94 416 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 RAB2BQ8WUD1 216 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 SNX19Q92543 992 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 DACT3Q96B18 629 aaPredicted RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 COPG2Q9UBF2 871 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ZC3H7BQ9UGR2 993 aaKnown RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 M0R3G1 203 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ARHGAP33O14559 1287 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 MYL4P12829 197 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 NCAM1P13591 858 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ACOT2P49753 483 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 PRKCQQ04759 706 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 MERTKQ12866 999 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 TRIM32Q13049 653 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 EIF2B5Q13144 721 aaKnown RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 FAXCQ5TGI0 409 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 FKBP9P1Q75LS8 142 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 NAT8LQ8N9F0 302 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 NT5C1BQ96P26 610 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 FAM96AQ9H5X1 160 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 AS3MTQ9HBK9 375 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ZMAT5Q9UDW3 170 aaKnown RBP15.29■□□□□ 0.04
VLDLR-202ENST00000382099 ZNF221Q9UK13 617 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
VLDLR-202ENST00000382099 VWA5AO00534 786 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 MTSS1O43312 755 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 SERPINE1P05121 402 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 GSNP06396 782 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 FAM86B2P0C5J1 330 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 DBTP11182 482 aaKnown RBP15.28■□□□□ 0.04
VLDLR-202ENST00000382099 HERC3Q15034 1050 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 HYIQ5T013 277 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 TPH2Q8IWU9 490 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 BEND7Q8N7W2 519 aaPredicted RBP15.28■□□□□ 0.04
VLDLR-202ENST00000382099 ZUFSPQ96AP4 578 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 GMIPQ9P107 970 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 KCNN3Q9UGI6 736 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 FARP1Q9Y4F1 1045 aaPredicted RBP15.28■□□□□ 0.04
VLDLR-202ENST00000382099 SCO2O43819 266 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 GCATO75600 419 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 ATF4P18848 351 aaPredicted RBP15.28■□□□□ 0.04
VLDLR-202ENST00000382099 PPP4R4Q6NUP7 873 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 RCOR2Q8IZ40 523 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 TMEM35BQ8NCS4 154 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 FLCNQ8NFG4 579 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 LPGAT1Q92604 370 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 NGLY1Q96IV0 654 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 CNDP1Q96KN2 507 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 FERD3LQ96RJ6 166 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 OR2B2Q9GZK3 357 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 ING2Q9H160 280 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 GPRC5CQ9NQ84 441 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 RPRD1BQ9NQG5 326 aaKnown RBP15.28■□□□□ 0.04
VLDLR-202ENST00000382099 PCM1Q15154 2024 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 E7ENX8 843 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 TMBIM6P55061 237 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 TMEM198Q66K66 360 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 MBLAC2Q68D91 279 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 SPOCD1Q6ZMY3 1216 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 LGI2Q8N0V4 545 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 PGAM4Q8N0Y7 254 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 PSD4Q8NDX1 1056 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 MAGED4Q96JG8 741 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 TCF12Q99081 682 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 APBA2Q99767 749 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 EFCAB1Q9HAE3 211 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 ARMC1Q9NVT9 282 aa15.28■□□□□ 0.04
VLDLR-202ENST00000382099 CNOT6Q9ULM6 557 aaKnown RBP15.28■□□□□ 0.04
VLDLR-202ENST00000382099 H0Y858 1186 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 XYLBO75191 536 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 RALBP11234 206 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 FGF3P11487 239 aaPredicted RBP15.27■□□□□ 0.04
VLDLR-202ENST00000382099 IFI30P13284 250 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 GMPRP36959 345 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 NT5C2P49902 561 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 CCDC142Q17RM4 750 aa15.27■□□□□ 0.04
VLDLR-202ENST00000382099 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms