RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 METTL2AQ96IZ6 378 aaKnown RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 TMEM246Q9BRR3 403 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 FOXP3Q9BZS1 431 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 DNM3Q9UQ16 869 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 DNALI1O14645 258 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 MEIS2O14770 477 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CFLARO15519 480 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 MTSS1O43312 755 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 HTRA2O43464 458 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 GLRA2P23416 452 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 KLRC2P26717 231 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ARNTP27540 789 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ADSSP30520 456 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 SLC9A3P48764 834 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 NUDT2P50583 147 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 HMGCS2P54868 508 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 GPS1Q13098 491 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 DSC3Q14574 896 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CALCRLQ16602 461 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 PPP1R3AQ16821 1122 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 TEX44Q53QW1 395 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 IGSF11Q5DX21 431 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ZFYVE27Q5T4F4 411 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 SDE2Q6IQ49 451 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 POLNQ7Z5Q5 900 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 BPIFB6Q8NFQ5 453 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 OR5H6Q8NGV6 325 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 SGCDQ92629 289 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 VPS33AQ96AX1 596 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 DACT3Q96B18 629 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 VCPIP1Q96JH7 1222 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CDRT15Q96T59 188 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ANKRD60Q9BZ19 345 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 TRPV6Q9H1D0 765 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 VANGL2Q9ULK5 521 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CAB39Q9Y376 341 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 A0A1W2PQ72 361 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ATP6V1G2-DDX39BF2Z307 99 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 PIK3R2O00459 728 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ACOX3O15254 700 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 DCXO43602 365 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 PEX10O60683 326 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CCNKO75909 580 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 RALAP11233 206 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ICAM2P13598 275 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ATF4P18848 351 aaPredicted RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CASP3P42574 277 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 GPLD1P80108 840 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 TAGLNQ01995 201 aaKnown RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 GAD2Q05329 585 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 FAAP100Q0VG06 881 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 PDPK2PQ6A1A2 396 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 FKBP9P1Q75LS8 142 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ARMC8Q8IUR7 673 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ZFP90Q8TF47 636 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ATP6V1E2Q96A05 226 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 DEPDC7Q96QD5 511 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CHID1Q9BWS9 393 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 ANO3Q9BYT9 981 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 WDR12Q9GZL7 423 aaKnown RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 MKRN2Q9H000 416 aaKnown RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CCSER2Q9H7U1 834 aa11.01□□□□□ -0.65
ITSN1-201ENST00000379960 CNOT11Q9UKZ1 510 aaKnown RBP11.01□□□□□ -0.65
ITSN1-201ENST00000379960 SLC22A1O15245 554 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
ITSN1-201ENST00000379960 RFPL2O75678 378 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 ALDH1A2O94788 518 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 PTPN9P43378 593 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 VAC14Q08AM6 782 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 GNA13Q14344 377 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 POU6F1Q14863 301 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 ECM1Q16610 540 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 MTX3Q5HYI7 312 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 SLC9A4Q6AI14 798 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 C16orf46Q6P387 395 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 CCDC60Q8IWA6 550 aaPredicted RBP11□□□□□ -0.65
ITSN1-201ENST00000379960 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 LRTOMTQ8WZ04 291 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 HERVK_113Q902F9 699 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 ZNF560Q96MR9 790 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 SLC13A1Q9BZW2 595 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 TMEM9Q9P0T7 183 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 TESMINQ9Y4I5 508 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 C12orf71A8MTZ7 269 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 FOXN3O00409 490 aaPredicted RBP11□□□□□ -0.65
ITSN1-201ENST00000379960 SGTAO43765 313 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 SCO1O75880 301 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 COX4I1P13073 169 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 ARSEP51690 589 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 DPYSQ14117 519 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 NXNQ6DKJ4 435 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 FAM122CQ6P4D5 195 aa11□□□□□ -0.65
ITSN1-201ENST00000379960 BNC2Q6ZN30 1099 aaPredicted RBP11□□□□□ -0.65
ITSN1-201ENST00000379960 ZCCHC7Q8N3Z6 543 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms