RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 TFPIP10646 304 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 VDRP11473 427 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 EIF2B2P49770 351 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 RAET1GQ6H3X3 334 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ARID3BQ8IVW6 561 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TEX47Q8TBZ9 253 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ANTXR1Q9H6X2 564 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TCF7L2Q9NQB0 619 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PSMD13Q9UNM6 376 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 OGTO15294 1046 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 RSL1D1O76021 490 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CYB5AP00167 134 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 IFNA6P05013 189 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 GMPSP49915 693 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ACTR3P61158 418 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CCDC36Q8IYA8 594 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 POP5Q969H6 163 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 SGF29Q96ES7 293 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ZFRQ96KR1 1074 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TBX20Q9UMR3 447 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 VPS4AQ9UN37 437 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 MAP3K4Q9Y6R4 1608 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 E7ENQ6 273 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 KPNA4O00629 521 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CPA3P15088 417 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ALOX12P18054 663 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CAPGP40121 348 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 NEK3P51956 506 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM46CQ5VWP2 391 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 BEND7Q8N7W2 519 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TRIM9Q9C026 710 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ATP13A1Q9HD20 1204 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 NDUFA13Q9P0J0 144 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PARNO95453 639 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ADH1CP00326 375 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 METTL21CQ5VZV1 264 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM136AQ96C01 138 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM92AA1XBS5 289 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ADSLP30566 484 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TAS2R41P59536 307 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 GPAT3Q53EU6 434 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CYB5R4Q7L1T6 521 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 RPS6KA6Q9UK32 745 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 MRPS23Q9Y3D9 190 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 HSDL2Q6YN16 418 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CRNNQ9UBG3 495 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 SEMA3DO95025 777 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 NAMPTP43490 491 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ARMC12Q5T9G4 340 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF563Q8TA94 476 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CCT8L2Q96SF2 557 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 MXRA8Q9BRK3 442 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 NUAK2Q9H093 628 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF222Q9UK12 451 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 SMNDC1O75940 238 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 RGS8P57771 180 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 STXBP1P61764 594 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PYDC2Q56P42 97 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 GRTP1Q5TC63 336 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CATSPERZQ9NTU4 200 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ERGIC3Q9Y282 383 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TPD52L2O43399 206 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CAV3P56539 151 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TRAF3Q13114 568 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 HECTD3Q5T447 861 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ARHGEF19Q8IW93 802 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PABPC3Q9H361 631 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CLN6Q9NWW5 311 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CCT8L1PA6NM43 557 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 FASP25445 335 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PDHA2P29803 388 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CPA2P48052 419 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TUBP50607 506 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CST11Q9H112 138 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 RHBDL2Q9NX52 303 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PRR12Q9ULL5 1215 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ADGRG1Q9Y653 693 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF608Q9ULD9 1512 aaPredicted RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 ABCA8O94911 1581 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 PEX14O75381 377 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 OGNP20774 298 aaKnown RBP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 DCKP27707 260 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 S100A3P33764 101 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 CDC42P60953 191 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 NEDD8Q15843 81 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 OVOS1Q6IE37 1185 aa11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCHD1-201ENST00000379361 FGF19O95750 216 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 ATXN7L2Q5T6C5 722 aaPredicted RBP11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 IL27RAQ6UWB1 636 aa11.38□□□□□ -0.59
PTCHD1-201ENST00000379361 RIPOR1Q6ZS17 1223 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms