RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ETNK2Q9NVF9 386 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 SUN2Q9UH99 717 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 HS3ST2Q9Y278 367 aa19.18■□□□□ 0.66
SSU72-203ENST00000378725 ZDBF2Q9HCK1 2354 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 KDELR3O43731 214 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 ATP9BO43861 1147 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 PALMO75781 387 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 GLDCP23378 1020 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 STK19P49842 368 aaPredicted RBP19.17■□□□□ 0.66
SSU72-203ENST00000378725 ARF5P84085 180 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 SERINC3Q13530 473 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 ZFYVE27Q5T4F4 411 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 KIAA1211LQ6NV74 962 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 TSSK4Q6SA08 328 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 NT5DC3Q86UY8 548 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 ARHGAP12Q8IWW6 846 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 KATNAL2Q8IYT4 538 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 SYCE1Q8N0S2 351 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 NPWQ8N729 165 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 PRSS33Q8NF86 280 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 FRS2Q8WU20 508 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 HMCESQ96FZ2 354 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 RNF157Q96PX1 679 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 CALN1Q9BXU9 219 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 POLMQ9NP87 494 aaPredicted RBP19.17■□□□□ 0.66
SSU72-203ENST00000378725 EBF1Q9UH73 591 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 SLC25A13Q9UJS0 675 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 GUCA1BQ9UMX6 200 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 PCDHA3Q9Y5H8 950 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 RAD54BQ9Y620 910 aa19.17■□□□□ 0.66
SSU72-203ENST00000378725 LRRD1A4D1F6 860 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CBX4O00257 560 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 APBB3O95704 486 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CD160O95971 181 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 MT-CO1P00395 513 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 EPHX1P07099 455 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 SP9P0CG40 484 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 C7P10643 843 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 HLA-EP13747 358 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 TNNT1P13805 278 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CTNNA2P26232 953 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CTNNA1P35221 906 aaKnown RBP19.16■□□□□ 0.66
SSU72-203ENST00000378725 NNMTP40261 264 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 TCF15Q12870 199 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CAMK2GQ13555 558 aaPredicted RBP19.16■□□□□ 0.66
SSU72-203ENST00000378725 TAZQ16635 292 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 HNRNPA1L2Q32P51 320 aaKnown RBP19.16■□□□□ 0.66
SSU72-203ENST00000378725 RETSATQ6NUM9 610 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 TMCO3Q6UWJ1 677 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 RASSF3Q86WH2 238 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 SH2D3CQ8N5H7 860 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 UBE2Q2Q8WVN8 375 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 KRT35Q92764 455 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CELF6Q96J87 481 aaKnown RBP19.16■□□□□ 0.66
SSU72-203ENST00000378725 HHIPQ96QV1 700 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 FAM126AQ9BYI3 521 aaPredicted RBP19.16■□□□□ 0.66
SSU72-203ENST00000378725 PRDM16Q9HAZ2 1276 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 HPCAL4Q9UM19 191 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.16■□□□□ 0.66
SSU72-203ENST00000378725 MFHAS1Q9Y4C4 1052 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 CAPN6Q9Y6Q1 641 aa19.16■□□□□ 0.66
SSU72-203ENST00000378725 MUC22E2RYF6 1773 aaPredicted RBP19.15■□□□□ 0.66
SSU72-203ENST00000378725 CCDC163A0A0D9SF12 145 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 TARSL2A2RTX5 802 aaKnown RBP19.15■□□□□ 0.66
SSU72-203ENST00000378725 TTC34A8MYJ7 566 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 SYNCRIPO60506 623 aaKnown RBP19.15■□□□□ 0.66
SSU72-203ENST00000378725 KRT1P04264 644 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 SRCP12931 536 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 PEX5P50542 639 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 CLCN6P51797 869 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 NRLP54845 237 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 STARD3Q14849 445 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 PAFAH1B3Q15102 231 aaKnown RBP19.15■□□□□ 0.66
SSU72-203ENST00000378725 RCOR2Q8IZ40 523 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 PQLC3Q8N755 202 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 TSTD1Q8NFU3 115 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 RNF25Q96BH1 459 aaPredicted RBP19.15■□□□□ 0.66
SSU72-203ENST00000378725 LZTFL1Q9NQ48 299 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 PRSS16Q9NQE7 514 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 AMFRQ9UKV5 643 aa19.15■□□□□ 0.66
SSU72-203ENST00000378725 CCDC66A2RUB6 948 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 ZSCAN5CA6NGD5 496 aaPredicted RBP19.14■□□□□ 0.65
SSU72-203ENST00000378725 ARHGAP42A6NI28 874 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 K7ERQ8 282 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 ALDH1A2O94788 518 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 ZRANB2O95218 330 aaKnown RBP eCLIP19.14■□□□□ 0.65
SSU72-203ENST00000378725 CDKN2BP42772 138 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 MARCKSL1P49006 195 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 SERPINH1P50454 418 aaKnown RBP19.14■□□□□ 0.65
SSU72-203ENST00000378725 PAPOLAP51003 745 aaKnown RBP19.14■□□□□ 0.65
SSU72-203ENST00000378725 GEMIN4P57678 1058 aaKnown RBP19.14■□□□□ 0.65
SSU72-203ENST00000378725 DMWDQ09019 674 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 DLG2Q15700 870 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 C9orf64Q5T6V5 341 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 NCBP2-AS2Q69YL0 99 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 MFSD7Q6UXD7 560 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 LINGO4Q6UY18 593 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 PEX26Q7Z412 305 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 ZNF366Q8N895 744 aa19.14■□□□□ 0.65
SSU72-203ENST00000378725 EXD1Q8NHP7 514 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms