RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 HCRTO43612 131 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 PIGRP01833 764 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 EEF1DP29692 281 aaKnown RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 ELF3P78545 371 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 ARHGAP15Q53QZ3 475 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 DENND1CQ8IV53 801 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 MYO1HQ8N1T3 1032 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 TEKT4Q8WW24 435 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 FIZ1Q96SL8 496 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 ALG9Q9H6U8 611 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 ARHGEF4Q9NR80 690 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SEPT3Q9UH03 358 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.268e-6■■■■■ 107
NPHP4-203ENST00000378169 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 FGF10O15520 208 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 CRYMQ14894 314 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 NR6A1Q15406 480 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 FBXO39Q8N4B4 442 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 KYQ8NBH2 561 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 MARK4Q96L34 752 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 ACOX2Q99424 681 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 C17orf80Q9BSJ5 609 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.41□□□□□ -0.264e-6■□□□□ 8.5
NPHP4-203ENST00000378169 DTNAQ9Y4J8 743 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 SNX5Q9Y5X3 404 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 MYH6P13533 1939 aa13.41□□□□□ -0.26
NPHP4-203ENST00000378169 URB1O60287 2271 aaKnown RBP13.41□□□□□ -0.26
NPHP4-203ENST00000378169 C2orf71A6NGG8 1288 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 YJEFN3A6XGL0 299 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 E7ENQ6 273 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 DUSP11O75319 330 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 H2AFYO75367 372 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CRABP2P29373 138 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PBLDP30039 288 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CYP2C18P33260 490 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 OR1D2P34982 312 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 SNX30Q5VWJ9 437 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 FAR2Q96K12 515 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ACE2Q9BYF1 805 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 FBXO5Q9UKT4 447 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 MYO1GB0I1T2 1018 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 BTN3A1O00481 513 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ENTPD5O75356 428 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ZNF135P52742 658 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 OGDHQ02218 1023 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PLOD1Q02809 727 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PACS1Q6VY07 963 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 TAS1R3Q7RTX0 852 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CYP4X1Q8N118 509 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ACTR8Q9H981 624 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ZDHHC18Q9NUE0 388 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 MRGBPQ9NV56 204 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CABYRO75952 493 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 TMEM63AO94886 807 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 LRIG2O94898 1065 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ZBTB48P10074 688 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 KLRC2P26717 231 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 WNT3AP56704 352 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 KPNB1Q14974 876 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 IZUMO2Q6UXV1 221 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 MFSD3Q96ES6 412 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 UXTQ9UBK9 157 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 MORF4L1Q9UBU8 362 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CNTRLQ7Z7A1 2325 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 KNL1Q8NG31 2342 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ATP6AP2A0A1C7CYW4 349 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 ATP6AP2O75787 350 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PKNOX1P55347 436 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 TAF10Q12962 218 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 NOGQ13253 232 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 NFYCQ13952 458 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 YTHDF3Q7Z739 585 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 HERC6Q8IVU3 1022 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 DQX1Q8TE96 717 aaKnown RBP13.4□□□□□ -0.26
NPHP4-203ENST00000378169 PCYT2Q99447 389 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CCDC134Q9H6E4 229 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 CHRAC1Q9NRG0 131 aa13.4□□□□□ -0.26
NPHP4-203ENST00000378169 SNX15Q9NRS6 342 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms