RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FAM192AQ9GZU8 254 aa15.27■□□□□ 0.03
NPHP4-201ENST00000378156 GRHL1Q9NZI5 618 aa15.27■□□□□ 0.03
NPHP4-201ENST00000378156 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.03
NPHP4-201ENST00000378156 IPPQ9Y573 584 aa15.27■□□□□ 0.03
NPHP4-201ENST00000378156 ARFGEF2Q9Y6D5 1785 aa15.27■□□□□ 0.03
NPHP4-201ENST00000378156 ENTPD5O75356 428 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 CCL23P55773 120 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PPP1R26Q5T8A7 1209 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 TRAPPC9Q96Q05 1148 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 POLR1EQ9GZS1 481 aaKnown RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ADSSP30520 456 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 BST1Q10588 318 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 CCDC153Q494R4 210 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PSTKQ8IV42 348 aaKnown RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 RNF148Q8N7C7 305 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 RIN3Q8TB24 985 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ZNF558Q96NG5 402 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 TSPAN18Q96SJ8 248 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 MAFBQ9Y5Q3 323 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 TCRBV9S1A1TA0A576 114 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 CARNS1A5YM72 827 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ADCY6O43306 1168 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PSMB4P28070 264 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 GALNTL6Q49A17 601 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 DCLRE1AQ6PJP8 1040 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 TSHZ1Q6ZSZ6 1077 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ARHGAP22Q7Z5H3 698 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 MYLPFQ96A32 169 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PHF21BQ96EK2 531 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PLEKHA8Q96JA3 519 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 VPS50Q96JG6 964 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 MRPS26Q9BYN8 205 aaKnown RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ZCWPW1Q9H0M4 648 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 PRDM12Q9H4Q4 367 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 RGS18Q9NS28 235 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ZMYND8Q9ULU4 1186 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 DERAQ9Y315 318 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 RPTORQ8N122 1335 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 TPP1O14773 563 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 XYLBO75191 536 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 CRABP2P29373 138 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ILF2Q12905 390 aaKnown RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 FASTKD3Q14CZ7 662 aaKnown RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 OASLQ15646 514 aaKnown RBP15.26■□□□□ 0.03
NPHP4-201ENST00000378156 IRGCQ6NXR0 463 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 OTOAQ7RTW8 1153 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 NETO2Q8NC67 525 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 CPXM1Q96SM3 734 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 KCNK4Q9NYG8 393 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 TAS2R13Q9NYV9 303 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 SFMBT1Q9UHJ3 866 aa15.26■□□□□ 0.03
NPHP4-201ENST00000378156 ZNF7P17097 686 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ARL2P36404 184 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 PPM1LQ5SGD2 360 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 LRRC74BQ6ZQY2 392 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 TOP6BLQ8N6T0 577 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ZFRQ96KR1 1074 aaKnown RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 SLC17A7Q9P2U7 560 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 SNX13Q9Y5W8 968 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 RAD54BQ9Y620 910 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 EDF1O60869 148 aaKnown RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 FCGR1AP12314 374 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 CREB1P16220 341 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 SOX6P35712 828 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 MATKP42679 507 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 PSEN1P49768 467 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 GRIK3Q13003 919 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 HECTD3Q5T447 861 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ARMC6Q6NXE6 501 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 RSPH1Q8WYR4 309 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 TLCD1Q96CP7 247 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 NMD3Q96D46 503 aaKnown RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 OSBPL7Q9BZF2 842 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ABCC6O95255 1503 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 PROCP04070 461 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ZBTB48P10074 688 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 PLIN5Q00G26 463 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 PRKAA1Q13131 559 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 KYAT3Q6YP21 454 aaKnown RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 OR52K1Q8NGK4 314 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ACTR8Q9H981 624 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 CNGB3Q9NQW8 809 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 MRPL17Q9NRX2 175 aaKnown RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 SMIM28A0A1B0GU29 152 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 SYNCRIPO60506 623 aaKnown RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ERBB2P04626 1255 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 FAM58BPP0C7Q3 252 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 PEX5P50542 639 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 CAMK2GQ13555 558 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-201ENST00000378156 TP53BP2Q13625 1128 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 C9orf57Q5W0N0 161 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 TRIM48Q8IWZ4 208 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 FAM9CQ8IZT9 166 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 IL22Q9GZX6 179 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 LHX5Q9H2C1 402 aa15.25■□□□□ 0.03
NPHP4-201ENST00000378156 ZNF214Q9UL59 606 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms