RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GPR63Q9BZJ6 419 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 TRPM5Q9NZQ8 1165 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 USP15Q9Y4E8 981 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 KATNA1O75449 491 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 RFPL2O75678 378 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ENO3P13929 434 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SLC8A1P32418 973 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PAPOLAP51003 745 aaKnown RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 NAGLUP54802 743 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 KCNJ2P63252 427 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 CREB5Q02930 508 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 CAV1Q03135 178 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SLC10A7Q0GE19 358 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 ZNF177Q13360 481 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 MPP3Q13368 585 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 IKBKEQ14164 716 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SIX1Q15475 284 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 KIF19Q2TAC6 998 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 RNF219Q5W0B1 726 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-203ENST00000378037 UNC93AQ86WB7 457 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SERAC1Q96JX3 654 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 PCDHB9Q9Y5E1 797 aa8.27□□□□□ -1.09
CKAP2-203ENST00000378037 SIPA1L1O43166 1804 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 BTNL10A8MVZ5 291 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 GRXCR1A8MXD5 290 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 ENPP3O14638 875 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 RHOCP08134 193 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 PRSS56P0CW18 603 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CYBAP13498 195 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 SELPP16109 830 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 NMBRP28336 390 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 PTPN7P35236 360 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 ZBTB17Q13105 803 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 STX3Q13277 289 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 TAF1BQ53T94 588 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 RNASEH2BQ5TBB1 312 aaKnown RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 C7orf61Q8IZ16 206 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 KCTD4Q8WVF5 259 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 MCRS1Q96EZ8 462 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 LHX5Q9H2C1 402 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 TMEM59LQ9UK28 342 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CDH9Q9ULB4 789 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CACNA1IQ9P0X4 2223 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 A0A096LPK6 155 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 DPYSL4O14531 572 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 MTX2O75431 263 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CCL5P13501 91 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 PROZP22891 400 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 AKT1P31749 480 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 IL1RL1Q01638 556 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 NFE2Q16621 373 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 SPRED3Q2MJR0 410 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 PPP1R2P3Q6NXS1 205 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 MARK2Q7KZI7 788 aaKnown RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 SLC26A9Q7LBE3 791 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 SERINC5Q86VE9 423 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 KCNMB4Q86W47 210 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 NUP93Q8N1F7 819 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 BBS5Q8N3I7 341 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 E2F7Q96AV8 911 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 HMCESQ96FZ2 354 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 HSFY1Q96LI6 401 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 TTPALQ9BTX7 342 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CINPQ9BW66 212 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 NUF2Q9BZD4 464 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 FAM129AQ9BZQ8 928 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 MTG2Q9H4K7 406 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 ANLNQ9NQW6 1124 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CD84Q9UIB8 345 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CDH22Q9UJ99 828 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 PCDHGC3Q9UN70 934 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
CKAP2-203ENST00000378037 RP1P56715 2156 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 APC2O95996 2303 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 CUL9Q8IWT3 2517 aa8.26□□□□□ -1.09
CKAP2-203ENST00000378037 A0A0A0MRY4 1105 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 SYNDIG1LA6NDD5 238 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 TK2O00142 265 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GABBR2O75899 941 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 PDE5AO76074 875 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 HAUS5O94927 633 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ZFXP17010 805 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 AXLP30530 894 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CTNNB1P35222 781 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GTF2A1P52655 376 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-203ENST00000378037 LBX1P52954 281 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GPX6P59796 221 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 DEFB103AP81534 67 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 GRIK3Q13003 919 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 CLLU1OSQ5K130 101 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 NCBP2-AS2Q69YL0 99 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 ITPRIPL1Q6GPH6 555 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 FOXR2Q6PJQ5 311 aa8.25□□□□□ -1.09
CKAP2-203ENST00000378037 NLRP9Q7RTR0 991 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms