RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SLC2A3	P11169	496 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CCND1	P24385	295 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	FASTKD3	Q14CZ7	662 aa	Known RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	BHLHA9	Q7RTU4	235 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ATP6V0D2	Q8N8Y2	350 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ZNF461	Q8TAF7	563 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	P2RY11	Q96G91	374 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CLSTN3	Q9BQT9	956 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CATSPERB	Q9H7T0	1116 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	NINJ2	Q9NZG7	142 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	KIAA0355	O15063	1070 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	AVIL	O75366	819 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	PIAS1	O75925	651 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	FGF18	O76093	207 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	TTC4	O95801	387 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	MX2	P20592	715 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CTNNB1	P35222	781 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	MAGOH	P61326	146 aa	Known RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	TWF1	Q12792	350 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC39A11	Q8N1S5	342 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ATP6V1G3	Q96LB4	118 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	FAM129A	Q9BZQ8	928 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ADAM7	Q9H2U9	754 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	SMOC2	Q9H3U7	446 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	ALG13	Q9NP73	1137 aa	Known RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	KCNK9	Q9NPC2	374 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	SHOC2	Q9UQ13	582 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	SH3GLB1	Q9Y371	365 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	IKBKG	Q9Y6K9	419 aa		11.94	□□□□□ -0.5
LMO7-204	ENST00000377499	PPM1A	P35813	382 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	ATP5C1	P36542	298 aa	Known RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	AIF1	P55008	147 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	FXN	Q16595	210 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	BRMS1L	Q5PSV4	323 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	LRIG3	Q6UXM1	1119 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	CTAGE3P	Q8IX95	158 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	ATPAF2	Q8N5M1	289 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	DNAAF3	Q8N9W5	541 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	BHMT	Q93088	406 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	DNAJC1	Q96KC8	554 aa	Known RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	AFF4	Q9UHB7	1163 aa	Known RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	FRMPD3	Q5JV73	1810 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	BCLAF3	A2AJT9	711 aa	Known RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499		I6L893	689 aa	Predicted RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	LIN7A	O14910	233 aa	Predicted RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	SEC24A	O95486	1093 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	JCHAIN	P01591	159 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	EPHB3	P54753	998 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	SESN2	P58004	480 aa	Predicted RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	KCTD21	Q4G0X4	260 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	PABPC1L	Q4VXU2	614 aa	Known RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	KDELC2	Q7Z4H8	507 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	OLA1	Q9NTK5	396 aa	Known RBP	11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	UBP1	Q9NZI7	540 aa		11.93	□□□□□ -0.5
LMO7-204	ENST00000377499	TRDMT1	O14717	391 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	UBTFL6	P0CB48	400 aa	Predicted RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	ATF6	P18850	670 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CYP4X1	Q8N118	509 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	TEX9	Q8N6V9	391 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	FBXO36	Q8NEA4	188 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	VN1R3	Q9BXE9	311 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	USP29	Q9HBJ7	922 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	MYO9B	Q13459	2157 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CCDC160	A6NGH7	325 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	LRG1	P02750	347 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CSH1	P0DML2	217 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CSH2	P0DML3	217 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	KRT15	P19012	456 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	SSTR1	P30872	391 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PHB	P35232	272 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	HARS2	P49590	506 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	RCN2	Q14257	317 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	SPARCL1	Q14515	664 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PPP2R5D	Q14738	602 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	TMED2	Q15363	201 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PLPP4	Q5VZY2	271 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	SLC8B1	Q6J4K2	584 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	C3orf62	Q6ZUJ4	267 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	CMTR2	Q8IYT2	770 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	PDCD7	Q8N8D1	485 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	ANKS4B	Q8N8V4	417 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	C2orf15	Q8WU43	125 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	SREK1	Q8WXA9	508 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	YIPF1	Q9Y548	306 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	MYO18A	Q92614	2054 aa	Known RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	KCNU1	A8MYU2	1149 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.92	□□□□□ -0.5
LMO7-204	ENST00000377499		E9PAM4	449 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	TMEM63A	O94886	807 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	METTL18	O95568	372 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	GALK1	P51570	392 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	FNBP1L	Q5T0N5	605 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	HECTD3	Q5T447	861 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	C6orf118	Q5T5N4	469 aa		11.92	□□□□□ -0.5
LMO7-204	ENST00000377499	EXOC3L1	Q86VI1	746 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms