RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 MBLAC1A4D2B0 266 aaPredicted RBP25.8■■□□□ 1.72
C9orf40-201ENST00000376854 YJEFN3A6XGL0 299 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.8■■□□□ 1.72
C9orf40-201ENST00000376854 ZBTB17Q13105 803 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 KLF10Q13118 480 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 LRRC36Q1X8D7 754 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 TCHHL1Q5QJ38 904 aaPredicted RBP25.8■■□□□ 1.72
C9orf40-201ENST00000376854 THEMIS2Q5TEJ8 643 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 KIAA0319Q5VV43 1072 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 EFCAB3Q8N7B9 438 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 HIPK4Q8NE63 616 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 ACVR1CQ8NER5 493 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 TRAPPC9Q96Q05 1148 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 EBF3Q9H4W6 596 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 IARS2Q9NSE4 1012 aaKnown RBP25.8■■□□□ 1.72
C9orf40-201ENST00000376854 CPSF2Q9P2I0 782 aaKnown RBP25.8■■□□□ 1.72
C9orf40-201ENST00000376854 FBXW11Q9UKB1 542 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 IPPQ9Y573 584 aa25.8■■□□□ 1.72
C9orf40-201ENST00000376854 MAGEB16A2A368 324 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 H2AFYO75367 372 aaKnown RBP25.79■■□□□ 1.72
C9orf40-201ENST00000376854 IQSEC1Q6DN90 963 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 PLEKHH3Q7Z736 793 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 PDSS2Q86YH6 399 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 ADAMTS6Q9UKP5 1117 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 CLEC11AQ9Y240 323 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 MTSS1O43312 755 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 FBXO21O94952 628 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 LTFP02788 710 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 GNAT1P11488 350 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 TPH1P17752 444 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 NFKB1P19838 968 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 HCAR3P49019 387 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 NPY2RP49146 381 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 CSE1LP55060 971 aaKnown RBP25.79■■□□□ 1.72
C9orf40-201ENST00000376854 HNRNPDQ14103 355 aaKnown RBP25.79■■□□□ 1.72
C9orf40-201ENST00000376854 METTL21CQ5VZV1 264 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 VPS39Q96JC1 886 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 GATA5Q9BWX5 397 aaPredicted RBP25.79■■□□□ 1.72
C9orf40-201ENST00000376854 TRHDEQ9UKU6 1024 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 SLC45A1Q9Y2W3 748 aa25.79■■□□□ 1.72
C9orf40-201ENST00000376854 NCAM1P13591 858 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 YY1P25490 414 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 DAOAP59103 153 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 LPCAT4Q643R3 524 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 ITPRIPL1Q6GPH6 555 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 HDAC11Q96DB2 347 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 OR52B2Q96RD2 323 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 TUBGCP5Q96RT8 1024 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 PTPN18Q99952 460 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 RTKNQ9BST9 563 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 BRD8Q9H0E9 1235 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 VCX3BQ9H321 246 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 TCF7L2Q9NQB0 619 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 DDIT4Q9NX09 232 aa25.78■■□□□ 1.72
C9orf40-201ENST00000376854 PDCD11Q14690 1871 aaKnown RBP25.78■■□□□ 1.72
C9orf40-201ENST00000376854 SERPINB6P35237 376 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 SLC30A9Q6PML9 568 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 ANKRD23Q86SG2 305 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 IL22Q9GZX6 179 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 ILKAPQ9H0C8 392 aaPredicted RBP25.77■■□□□ 1.72
C9orf40-201ENST00000376854 PAPOLBQ9NRJ5 636 aaKnown RBP25.77■■□□□ 1.72
C9orf40-201ENST00000376854 OXSMQ9NWU1 459 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 ZDHHC7Q9NXF8 308 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 SLC39A10Q9ULF5 831 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 EME2A4GXA9 379 aaPredicted RBP25.77■■□□□ 1.72
C9orf40-201ENST00000376854 GOLGA8TH3BQL2 631 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 GABRDO14764 452 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 F2P00734 622 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 IGFBP6P24592 240 aaPredicted RBP25.77■■□□□ 1.72
C9orf40-201ENST00000376854 SMG8Q8ND04 991 aaKnown RBP25.77■■□□□ 1.72
C9orf40-201ENST00000376854 GBP5Q96PP8 586 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 MCMBPQ9BTE3 642 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 KLHL4Q9C0H6 718 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 CRTAC1Q9NQ79 661 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 UBP1Q9NZI7 540 aa25.77■■□□□ 1.72
C9orf40-201ENST00000376854 GLDCP23378 1020 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 MTTPP55157 894 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 ARL13BQ3SXY8 428 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 INTS6LQ5JSJ4 861 aaKnown RBP25.76■■□□□ 1.71
C9orf40-201ENST00000376854 GPRIN1Q7Z2K8 1008 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 GDPD5Q8WTR4 605 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 LENG8Q96PV6 779 aaPredicted RBP25.76■■□□□ 1.71
C9orf40-201ENST00000376854 MID2Q9UJV3 735 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 SSX2IPQ9Y2D8 614 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 CHRNGP07510 517 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 USP17L7P0C7H9 530 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 NMBRP28336 390 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 LRPAP1P30533 357 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 GALNT2Q10471 571 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 SFT2D3Q587I9 215 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 MOCOSQ96EN8 888 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 KCNK16Q96T55 309 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 ACE2Q9BYF1 805 aaPredicted RBP25.76■■□□□ 1.71
C9orf40-201ENST00000376854 TASP1Q9H6P5 420 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 SNX10Q9Y5X0 201 aa25.76■■□□□ 1.71
C9orf40-201ENST00000376854 TSC2P49815 1807 aa25.75■■□□□ 1.71
C9orf40-201ENST00000376854 GOLGA8QA0A0J9YX86 632 aa25.75■■□□□ 1.71
C9orf40-201ENST00000376854 GOLGA8OA6NCC3 632 aa25.75■■□□□ 1.71
C9orf40-201ENST00000376854 C9IYK1 514 aa25.75■■□□□ 1.71
C9orf40-201ENST00000376854 GOLGA8NF8WBI6 632 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms