RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 FBXW11Q9UKB1 542 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 SLC39A10Q9ULF5 831 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 SSX2IPQ9Y2D8 614 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 GOLGA8QA0A0J9YX86 632 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SMIM35A0A1B0GVV1 85 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 GOLGA8OA6NCC3 632 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 GOLGA8NF8WBI6 632 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 GOLGA8TH3BQL2 631 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 STRNO43815 780 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 LTFP02788 710 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SMIM10L2AP0DMW4 78 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SMIM10L2BP0DMW5 78 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 GLDCP23378 1020 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SERPINB5P36952 375 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 HCAR3P49019 387 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 CSE1LP55060 971 aaKnown RBP14.83□□□□□ -0.04
MSH5-201ENST00000375703 MTTPP55157 894 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 MED21Q13503 144 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 ZNF467Q7Z7K2 595 aaPredicted RBP14.83□□□□□ -0.04
MSH5-201ENST00000375703 GALNT15Q8N3T1 639 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 TMEM40Q8WWA1 233 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 NTAN1Q96AB6 310 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 MOCOSQ96EN8 888 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 VPS39Q96JC1 886 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SH3GL3Q99963 347 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 GBA3Q9H227 469 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 TLK1Q9UKI8 766 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 TRHDEQ9UKU6 1024 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 YJEFN3A6XGL0 299 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 I6L893 689 aaPredicted RBP14.83□□□□□ -0.04
MSH5-201ENST00000375703 MTSS1O43312 755 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 AMHP03971 560 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 THRAP10827 490 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 NCAM1P13591 858 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 RAG1P15918 1043 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 NFKB1P19838 968 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SAT1P21673 171 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 SEMA3BQ13214 749 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 ITPRIPL1Q6GPH6 555 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 NPWQ8N729 165 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 TSPAN18Q96SJ8 248 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 IL22Q9GZX6 179 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 TASP1Q9H6P5 420 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 WDR55Q9H6Y2 383 aaPredicted RBP14.83□□□□□ -0.04
MSH5-201ENST00000375703 UBP1Q9NZI7 540 aa14.83□□□□□ -0.04
MSH5-201ENST00000375703 AIM2O14862 343 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 CHRNGP07510 517 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 FAM200BP0CF97 657 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 UQCRBP14927 111 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 PEX2P28328 305 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 ZBTB17Q13105 803 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 TRIP10Q15642 601 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 FAM43BQ6ZT52 329 aaPredicted RBP14.82□□□□□ -0.04
MSH5-201ENST00000375703 ACAD11Q709F0 780 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 KBTBD6Q86V97 674 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 GTF3C2Q8WUA4 911 aaPredicted RBP14.82□□□□□ -0.04
MSH5-201ENST00000375703 PPP1R36Q96LQ0 422 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 ACE2Q9BYF1 805 aaPredicted RBP14.82□□□□□ -0.04
MSH5-201ENST00000375703 ACSS2Q9NR19 701 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 MID2Q9UJV3 735 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 DYNC1LI2O43237 492 aaPredicted RBP14.82□□□□□ -0.04
MSH5-201ENST00000375703 FBXO21O94952 628 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 NMBRP28336 390 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 AQP4P55087 323 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 DAOAP59103 153 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 XIAPP98170 497 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 ROR2Q01974 943 aaKnown RBP14.82□□□□□ -0.04
MSH5-201ENST00000375703 SCAPQ12770 1279 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 PPP2R5DQ14738 602 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 GRM3Q14832 879 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 SNX17Q15036 470 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 ARL13BQ3SXY8 428 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 UBXN11Q5T124 520 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 KIAA0319Q5VV43 1072 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 IQSEC1Q6DN90 963 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 ARRDC4Q8NCT1 418 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 HDAC11Q96DB2 347 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 DDIT4Q9NX09 232 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 RAP2CQ9Y3L5 183 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 RALGAPA2Q2PPJ7 1873 aa14.82□□□□□ -0.04
MSH5-201ENST00000375703 RGSL1A5PLK6 1076 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 MATN2O00339 956 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 NEMP1O14524 444 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 JCHAINP01591 159 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 APOA4P06727 396 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 VCLP18206 1134 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 IGFBP6P24592 240 aaPredicted RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 MPSTP25325 297 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 HADHAP40939 763 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 RPL14P50914 215 aaKnown RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 MSLNQ13421 630 aaPredicted RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 ANO4Q32M45 955 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 INTS6LQ5JSJ4 861 aaKnown RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 RASIP1Q5U651 963 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 CWF19L1Q69YN2 538 aaKnown RBP14.81□□□□□ -0.04
MSH5-201ENST00000375703 TSNARE1Q96NA8 513 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 APBA2Q99767 749 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
MSH5-201ENST00000375703 CCDC28BQ9BUN5 200 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms