RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 KLF11O14901 512 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 PIAS1O75925 651 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 UBOX5O94941 541 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SLC2A3P11169 496 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 MGAT1P26572 445 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 GRIA1P42261 906 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SLC5A3P53794 718 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 MGAT5Q09328 741 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SF3A3Q12874 501 aaKnown RBP eCLIP8.38□□□□□ -1.073e-6■■■■■ 28.4
UBR4-202ENST00000375224 LBRQ14739 615 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 SPDYAQ5MJ70 313 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 STXBP5Q5T5C0 1151 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 ATG16L1Q676U5 607 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 LINC00523Q86TU6 105 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 LRRC49Q8IUZ0 686 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBR4-202ENST00000375224 RAB3IL1Q8TBN0 382 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 WDR60Q8WVS4 1066 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 ATP2A3Q93084 1043 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 C8orf48Q96LL4 319 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TSGA13Q96PP4 275 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TRAPPC9Q96Q05 1148 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SRPK1Q96SB4 655 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 ELAC1Q9H777 363 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 PLAC1Q9HBJ0 212 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 STARD7Q9NQZ5 370 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 FNIP2Q9P278 1114 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TXNDC16Q9P2K2 825 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TMED5Q9Y3A6 229 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 ZNF638Q14966 1978 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 FRMPD3Q5JV73 1810 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 KCNK1O00180 336 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TADA2AO75478 443 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TGDSO95455 350 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 CSH1P0DML2 217 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 CSH2P0DML3 217 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SRGAP2BP0DMP2 458 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 CCNCP24863 283 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 CRHR1P34998 444 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 ETV4P43268 484 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 OR1G1P47890 313 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 BNIP1Q12981 228 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 EIF4EBP2Q13542 120 aaPredicted RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 INAQ16352 499 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 FAM133BQ5BKY9 247 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 MON1AQ86VX9 555 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 COLGALT2Q8IYK4 626 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 OXNAD1Q96HP4 312 aaPredicted RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 SERPINB11Q96P15 392 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 FAM111AQ96PZ2 611 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TMEM209Q96SK2 561 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TSSK1BQ9BXA7 367 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TRIM55Q9BYV6 548 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBR4-202ENST00000375224 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SMYD2Q9NRG4 433 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TXLNGQ9NUQ3 528 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TMEM161AQ9NX61 479 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SLC17A7Q9P2U7 560 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 PLLPQ9Y342 182 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 NLRC5Q86WI3 1866 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TNFRSF10BO14763 440 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 RFPL1O75677 317 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TPPPO94811 219 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SERPINB4P48594 390 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 NRG1Q02297 640 aaPredicted RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 DEFB115Q30KQ5 88 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SLC39A12Q504Y0 691 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TRMT10BQ6PF06 316 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 OTOAQ7RTW8 1153 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 RTN4RL1Q86UN2 441 aaPredicted RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 SCN4BQ8IWT1 228 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 NUP93Q8N1F7 819 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SLC35B4Q969S0 331 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 TEKT5Q96M29 485 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 LRRC37BQ96QE4 947 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 GPBP1L1Q9HC44 474 aaPredicted RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 SLCO1B3Q9NPD5 702 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 CASS4Q9NQ75 786 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 SCML2Q9UQR0 700 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 AAR2Q9Y312 384 aaKnown RBP8.38□□□□□ -1.07
UBR4-202ENST00000375224 ZNF711Q9Y462 761 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
UBR4-202ENST00000375224 WDR91A4D1P6 747 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ITGB1P05556 798 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 HOXC13P31276 330 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 MAGEA11P43364 429 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 INHBCP55103 352 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 OXCT1P55809 520 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 USP46P62068 366 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 NIPAL4Q0D2K0 466 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 BFSP2Q13515 415 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 CLLU1OSQ5K130 101 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 NAPEPLDQ6IQ20 393 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 RWDD4Q6NW29 188 aaKnown RBP8.37□□□□□ -1.07
UBR4-202ENST00000375224 LONP2Q86WA8 852 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 DNAAF3Q8N9W5 541 aa8.37□□□□□ -1.07
UBR4-202ENST00000375224 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms