RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RAB3IPQ96QF0 476 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 CPNE1Q99829 537 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 FICDQ9BVA6 458 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 OXCT2Q9BYC2 517 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 SMOC2Q9H3U7 446 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 GMIPQ9P107 970 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 CPSF2Q9P2I0 782 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 PCDHB8Q9UN66 801 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 DNAJC16Q9Y2G8 782 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 RAD54BQ9Y620 910 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 MYO16Q9Y6X6 1858 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 E9PAM4 449 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 H0Y3Z8 333 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 MAFKO60675 156 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 SNNO75324 88 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 TADA2AO75478 443 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 USP1O94782 785 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 HLA-DQB2P05538 268 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 ENO1P06733 434 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 EFEMP1Q12805 493 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 RIPK1Q13546 671 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 ITGA9Q13797 1035 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 TRAF7Q6Q0C0 670 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 KYAT3Q6YP21 454 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 RINLQ6ZS11 566 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 SLC24A5Q71RS6 500 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 TRIM42Q8IWZ5 723 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 KCNV2Q8TDN2 545 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 APBB2Q92870 758 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 UROC1Q96N76 676 aa16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 NKX1-2Q9UD57 310 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-202ENST00000374253 MTSS1O43312 755 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 ENTPD5O75356 428 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PTPN4P29074 926 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 ERFP50548 548 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 MAXP61244 160 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 UBAP2LQ14157 1087 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PRPSAP1Q14558 356 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 ARTNQ5T4W7 220 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PIK3R6Q5UE93 754 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 COLGALT2Q8IYK4 626 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 TTC8Q8TAM2 541 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PTCD3Q96EY7 689 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 FAM193BQ96PV7 902 aaPredicted RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 CADM1Q9BY67 442 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PNPOQ9NVS9 261 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 RBM22Q9NW64 420 aaKnown RBP eCLIP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 SLC2A6Q9UGQ3 507 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 SLC39A10Q9ULF5 831 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 A0A096LPK6 155 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 DNAJC6O75061 913 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PROCP04070 461 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 TYMPP19971 482 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 SLC1A6P48664 564 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PAPOLAP51003 745 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 NKX3-2P78367 333 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 CDH17Q12864 832 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 MPP3Q13368 585 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 ZNF460Q14592 562 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 VARS2Q5ST30 1063 aaKnown RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 GRTP1Q5TC63 336 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 VWA5B1Q5TIE3 1220 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 FAM171A1Q5VUB5 890 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 CIR1Q86X95 450 aaPredicted RBP16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 INPP5DQ92835 1189 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 NSL1Q96IY1 281 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 KLHL5Q96PQ7 755 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 FTHL17Q9BXU8 183 aa16.27■□□□□ 0.2
CNKSR1-202ENST00000374253 PHGDHO43175 533 aaKnown RBP16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 TRPA1O75762 1119 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 CNTN5O94779 1100 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 ESRRAP11474 423 aaPredicted RBP16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 CST5P28325 142 aaPredicted RBP16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 SPRP35270 261 aaPredicted RBP16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 LIMK2P53671 638 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 KDSRQ06136 332 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 DSC1Q08554 894 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 CTBP1Q13363 440 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 PSMD5Q16401 504 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 DENND6AQ8IWF6 608 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 SPATA6LQ8N4H0 392 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 TBL1YQ9BQ87 522 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 IL22Q9GZX6 179 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 BRD8Q9H0E9 1235 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 THAP1Q9NVV9 213 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 DCDC2Q9UHG0 476 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 BIRC5O15392 142 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 NEBLO76041 1014 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 RPSAP08865 295 aaKnown RBP16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 SKIP12755 728 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 SLC8A1P32418 973 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 GLRBP48167 497 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 RASSF2P50749 326 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 GRM3Q14832 879 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 NAPEPLDQ6IQ20 393 aa16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 ESRP1Q6NXG1 681 aaKnown RBP16.26■□□□□ 0.19
CNKSR1-202ENST00000374253 SLC25A41Q8N5S1 370 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms