RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 GMIPQ9P107 970 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 THEGQ9P2T0 379 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 NUDT5Q9UKK9 219 aa14.64□□□□□ -0.07
HMGA1-203ENST00000374116 RPL26L1Q9UNX3 145 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 MRPS23Q9Y3D9 190 aaKnown RBP14.64□□□□□ -0.07
HMGA1-203ENST00000374116 OBSL1O75147 1896 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 E7ESA3 106 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 SUN1O94901 812 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 F11P03951 625 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 ACADSP16219 412 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 ATP6V1C1P21283 382 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 YWHAQP27348 245 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 ALDH3A1P30838 453 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 ACADSBP45954 432 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 SLC18A1P54219 525 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 HDAC4P56524 1084 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 MMRN1Q13201 1228 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 SMAD4Q13485 552 aaKnown RBP14.63□□□□□ -0.07
HMGA1-203ENST00000374116 MPP2Q14168 576 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 LRRC14Q15048 493 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 PRSS36Q5K4E3 855 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 DARS2Q6PI48 645 aaKnown RBP14.63□□□□□ -0.07
HMGA1-203ENST00000374116 TRABD2AQ86V40 505 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 ANKRD42Q8N9B4 389 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 FAM71DQ8N9W8 422 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.63□□□□□ -0.07
HMGA1-203ENST00000374116 PYROXD1Q8WU10 500 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 SUSD6Q92537 303 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 ZSWIM3Q96MP5 696 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 TRAPPC9Q96Q05 1148 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 RAB3IPQ96QF0 476 aaPredicted RBP14.63□□□□□ -0.07
HMGA1-203ENST00000374116 CYP2S1Q96SQ9 504 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 C10orf88Q9H8K7 445 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 LRRC4Q9HBW1 653 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 OSER1Q9NX31 292 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 CLUHO75153 1309 aa14.63□□□□□ -0.07
HMGA1-203ENST00000374116 DPPA5A6NC42 116 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 C2orf78A6NCI8 922 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FOXO6A8MYZ6 492 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 ZNF487B1APH4 448 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 MDM4O15151 490 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 TGM2P21980 687 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FSHRP23945 695 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 STX2P32856 288 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 CDO1Q16878 200 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 RAB41Q5JT25 222 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 ANKRD22Q5VYY1 191 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 HFE2Q6ZVN8 426 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 RTL10Q7L3V2 364 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 ENDOVQ8N8Q3 282 aaKnown RBP14.62□□□□□ -0.07
HMGA1-203ENST00000374116 ATP11CQ8NB49 1132 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 TTC16Q8NEE8 873 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FAM172AQ8WUF8 416 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 MAGEB18Q96M61 343 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 RIPOR3Q96MK2 946 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 ADAM33Q9BZ11 813 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 SMG9Q9H0W8 520 aaKnown RBP14.62□□□□□ -0.07
HMGA1-203ENST00000374116 NMUR1Q9HB89 426 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 TRPC7Q9HCX4 862 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 ANAPC1Q9H1A4 1944 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 A0A1W2PQH9 124 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 CFAP69A5D8W1 941 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FAM47DPA6NHR8 397 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 TCP11X1B4DZS4 312 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 POC1B-GALNT4F8VUJ3 575 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 GOLGA8MH3BSY2 632 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 PRPF4O43172 522 aaKnown RBP eCLIP14.62□□□□□ -0.07
HMGA1-203ENST00000374116 EFHC2Q5JST6 749 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 HP1BP3Q5SSJ5 553 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FNBP1LQ5T0N5 605 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 PDIK1LQ8N165 341 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 SIX6OS1Q8N1H7 587 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 KCTD13Q8WZ19 329 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FGF13Q92913 245 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 FAF2Q96CS3 445 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 IFT43Q96FT9 208 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 MYRFLQ96LU7 910 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 SLC22A12Q96S37 553 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 MYADMQ96S97 322 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 RNPEPL1Q9HAU8 725 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 IRAK4Q9NWZ3 460 aa14.62□□□□□ -0.07
HMGA1-203ENST00000374116 XPO7Q9UIA9 1087 aaKnown RBP14.62□□□□□ -0.07
HMGA1-203ENST00000374116 DENND4CQ5VZ89 1909 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 DOCK8Q8NF50 2099 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 YJEFN3A6XGL0 299 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 APOL1O14791 398 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 PAPLNO95428 1278 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 TBX18O95935 607 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 TFE3P19532 575 aaPredicted RBP14.61□□□□□ -0.07
HMGA1-203ENST00000374116 MTHFRP42898 656 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 EPHA5P54756 1037 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 GEMIN4P57678 1058 aaKnown RBP14.61□□□□□ -0.07
HMGA1-203ENST00000374116 GPX6P59796 221 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 IL9RQ01113 521 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 CBLBQ13191 982 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 LAMB3Q13751 1172 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 KLHL38Q2WGJ6 581 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 SCYL2Q6P3W7 929 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 NPNTQ6UXI9 565 aa14.61□□□□□ -0.07
HMGA1-203ENST00000374116 ANKMY2Q8IV38 441 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms