RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 NMBRP28336 390 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 RPL9P32969 192 aaKnown RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 PDPK2PQ6A1A2 396 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 NAPEPLDQ6IQ20 393 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 POU5F2Q8N7G0 328 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 USP33Q8TEY7 942 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 SCG3Q8WXD2 468 aaKnown RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 DPF3Q92784 378 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 VPS39Q96JC1 886 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 OSBPL1AQ9BXW6 950 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 OXCT2Q9BYC2 517 aaPredicted RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 CHST12Q9NRB3 414 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 GIT1Q9Y2X7 761 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 WASF2Q9Y6W5 498 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 GOLGA8TH3BQL2 631 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 HSPA4LO95757 839 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 SRGAP2BP0DMP2 458 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 ODC1P11926 461 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 MYL4P12829 197 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 RGS2P41220 211 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 ACTR3P61158 418 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 SLC25A3Q00325 362 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 PAN2Q504Q3 1202 aaKnown RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 C1orf146Q5VVC0 180 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 RWDD4Q6NW29 188 aaKnown RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 NAPRTQ6XQN6 538 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 OTOP3Q7RTS5 596 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 ZSCAN18Q8TBC5 510 aaPredicted RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 DQX1Q8TE96 717 aaKnown RBP17.03■□□□□ 0.32
HDAC8-206ENST00000373571 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
HDAC8-206ENST00000373571 PDHA1P08559 390 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 COPAP53621 1224 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 COG7P83436 770 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 USP4Q13107 963 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 ZRSR2Q15696 482 aaKnown RBP17.02■□□□□ 0.32
HDAC8-206ENST00000373571 ZNF781Q8N8C0 355 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 PPFIBP2Q8ND30 876 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 SREK1Q8WXA9 508 aaKnown RBP17.02■□□□□ 0.32
HDAC8-206ENST00000373571 MCMBPQ9BTE3 642 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 SENP6Q9GZR1 1112 aaPredicted RBP17.02■□□□□ 0.32
HDAC8-206ENST00000373571 NMRAL1Q9HBL8 299 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 ANGPTL2Q9UKU9 493 aa17.02■□□□□ 0.32
HDAC8-206ENST00000373571 COL4A4P53420 1690 aaPredicted RBP17.02■□□□□ 0.31
HDAC8-206ENST00000373571 CCDC78A2IDD5 438 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 TMEM114B3SHH9 223 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 AP3B1O00203 1094 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 DFFAO00273 331 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 CHRNA1P02708 482 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 AKR1A1P14550 325 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 NCF2P19878 526 aaPredicted RBP17.02■□□□□ 0.31
HDAC8-206ENST00000373571 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.31
HDAC8-206ENST00000373571 CFAP157Q5JU67 520 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 GDF6Q6KF10 455 aaPredicted RBP17.02■□□□□ 0.31
HDAC8-206ENST00000373571 FAM171BQ6P995 826 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 ARHGAP36Q6ZRI8 547 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 LINC00523Q86TU6 105 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 METTL23Q86XA0 190 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 MYLK4Q86YV6 388 aaPredicted RBP17.02■□□□□ 0.31
HDAC8-206ENST00000373571 CNTD1Q8N815 330 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 APBA2Q99767 749 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 ACBD6Q9BR61 282 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 SIK2Q9H0K1 926 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 CDH19Q9H159 772 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 DMAP1Q9NPF5 467 aaPredicted RBP17.02■□□□□ 0.31
HDAC8-206ENST00000373571 SLC39A10Q9ULF5 831 aa17.02■□□□□ 0.31
HDAC8-206ENST00000373571 A0A088AWK7 358 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 PSMD3O43242 534 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 TRIM13O60858 407 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 BRCC3P46736 316 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 ERFP50548 548 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 PPP2R5DQ14738 602 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 GRM3Q14832 879 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 TSGA13Q96PP4 275 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
HDAC8-206ENST00000373571 OSBPL2Q9H1P3 480 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 COG4Q9H9E3 785 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 TMLHEQ9NVH6 421 aa17.01■□□□□ 0.31
HDAC8-206ENST00000373571 MAP3K7O43318 606 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 B3GAT3O94766 335 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 POMCP01189 267 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 DNAJB2P25686 324 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 ZNF33AQ06730 810 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 ANO4Q32M45 955 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 GNASQ5JWF2 1037 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 CXCL17Q6UXB2 119 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
HDAC8-206ENST00000373571 RAPH1Q70E73 1250 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 SPATA22Q8NHS9 363 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 GPR22Q99680 433 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 KIFC1Q9BW19 673 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 NSMCE4AQ9NXX6 385 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 CPSF2Q9P2I0 782 aaKnown RBP17■□□□□ 0.31
HDAC8-206ENST00000373571 CORO1CQ9ULV4 474 aaPredicted RBP17■□□□□ 0.31
HDAC8-206ENST00000373571 NEU3Q9UQ49 428 aa17■□□□□ 0.31
HDAC8-206ENST00000373571 GTF3C5Q9Y5Q8 519 aaPredicted RBP17■□□□□ 0.31
HDAC8-206ENST00000373571 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms