RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 WDR60Q8WVS4 1066 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 FIG4Q92562 907 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 MBOAT7Q96N66 472 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 TRAPPC9Q96Q05 1148 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 TBL1YQ9BQ87 522 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 ALG9Q9H6U8 611 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 DMAP1Q9NPF5 467 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-204ENST00000373380 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 FANCGO15287 622 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 PAPSS1O43252 624 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-204ENST00000373380 ZNF862O60290 1169 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 PEX10O60683 326 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 CPSF4O95639 269 aaKnown RBP11.06□□□□□ -0.64
CSMD2-204ENST00000373380 COX4I1P13073 169 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 ANPEPP15144 967 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 BEX3Q00994 111 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 ROR2Q01974 943 aaKnown RBP11.06□□□□□ -0.64
CSMD2-204ENST00000373380 GBE1Q04446 702 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 BNIP1Q12981 228 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 MAP1SQ66K74 1059 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-204ENST00000373380 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 NT5DC4Q86YG4 428 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 ULK2Q8IYT8 1036 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 CPT1BQ92523 772 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 GLMNQ92990 594 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 TLCD1Q96CP7 247 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 FAM120BQ96EK7 910 aaKnown RBP11.06□□□□□ -0.64
CSMD2-204ENST00000373380 CLPTM1LQ96KA5 538 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 SLC25A23Q9BV35 468 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 IL22Q9GZX6 179 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 DSEQ9UL01 958 aa11.06□□□□□ -0.64
CSMD2-204ENST00000373380 NFASCO94856 1347 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 RPTORQ8N122 1335 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PTGES3LE9PB15 166 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 CLDN5O00501 218 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 TOMM70O94826 608 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ERBB2P04626 1255 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 CD48P09326 243 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 CHRNB2P17787 502 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PTGIRP43119 386 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 GRIA4P48058 902 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 GSSP48637 474 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 RTP1P59025 263 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PFKFB4Q16877 469 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 BNIPLQ7Z465 357 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 C10orf107Q8IVU9 208 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ATG16L2Q8NAA4 619 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 HSFY1Q96LI6 401 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 FAM210AQ96ND0 272 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 NDNQ99608 321 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PARVBQ9HBI1 364 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PCDH18Q9HCL0 1135 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 RRN3Q9NYV6 651 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 TAS2R13Q9NYV9 303 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PCDHB7Q9Y5E2 793 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 CASZ1Q86V15 1759 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 CCNT2O60583 730 aaKnown RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 LDLRP01130 860 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 HNRNPLP14866 589 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ATP6V1C1P21283 382 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 LRPAP1P30533 357 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 SAMD4BQ5PRF9 694 aaKnown RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 C9orf131Q5VYM1 1079 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ZFP1Q6P2D0 407 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 OLFML1Q6UWY5 402 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 TNIP2Q8NFZ5 429 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 OTUB1Q96FW1 271 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 VAT1Q99536 393 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 COLEC11Q9BWP8 271 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ELOVL6Q9H5J4 265 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 CAB39LQ9H9S4 337 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 DMAC2Q9NW81 257 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 NOCTQ9UK39 431 aaKnown RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 KCNH4Q9UQ05 1017 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 BTN3A1O00481 513 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 HDAC3O15379 428 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 GSC2O15499 205 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 HNRNPRO43390 633 aaKnown RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 LGR5O75473 907 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 MBL2P11226 248 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 NPR3P17342 541 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ARF4P18085 180 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ITGALP20701 1170 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 RGS2P41220 211 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 POLD3Q15054 466 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 UNC93AQ86WB7 457 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ANKRD52Q8NB46 1076 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 ZNF670Q9BS34 389 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 PCDHA11Q9Y5I1 949 aa11.05□□□□□ -0.64
CSMD2-204ENST00000373380 C1orf232A0A0U1RR37 186 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms