RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SPRP35270 261 aaPredicted RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 RPL14P50914 215 aaKnown RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 PKNOX1P55347 436 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 KCTD21Q4G0X4 260 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 SPRYD7Q5W111 196 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 OR6B2Q6IFH4 312 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 MAMDC4Q6UXC1 1216 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 FAM183BPQ6ZVS7 135 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 RIN3Q8TB24 985 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 BRI3BPQ8WY22 251 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 RBBP8Q99708 897 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 DRC3Q9H069 523 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 R3HDMLQ9H3Y0 253 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 CLK4Q9HAZ1 481 aaKnown RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 MRGBPQ9NV56 204 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 NOP56O00567 594 aaKnown RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 HSPA1AP0DMV8 641 aaKnown RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 HSPA1BP0DMV9 641 aaKnown RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 TCF7P36402 384 aaPredicted RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 DPP6P42658 865 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 ZNF157P51786 506 aaPredicted RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 LIMK2P53671 638 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 TARBP2Q15633 366 aaKnown RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 DPYSL2Q16555 572 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 CDO1Q16878 200 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 KCNT2Q6UVM3 1135 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 TMIGD2Q96BF3 282 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 TWNKQ96RR1 684 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 GPBP1L1Q9HC44 474 aaPredicted RBP17.74■□□□□ 0.43
CHTOP-203ENST00000368690 GPATCH2LQ9NWQ4 482 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 OXSMQ9NWU1 459 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 ITGB1BP2Q9UKP3 347 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 AP4S1Q9Y587 144 aa17.74■□□□□ 0.43
CHTOP-203ENST00000368690 CLASP2O75122 1294 aaKnown RBP17.73■□□□□ 0.43
CHTOP-203ENST00000368690 POLBP06746 335 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 ENO3P13929 434 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-203ENST00000368690 SP4Q02446 784 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 TRAP1Q12931 704 aaKnown RBP17.73■□□□□ 0.43
CHTOP-203ENST00000368690 PRKAA1Q13131 559 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 ZBED5Q49AG3 693 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 PDCD4Q53EL6 469 aaKnown RBP17.73■□□□□ 0.43
CHTOP-203ENST00000368690 FAM182AQ5T1J6 154 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 KRT80Q6KB66 452 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 SCYL2Q6P3W7 929 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 DCLK2Q8N568 766 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 SGF29Q96ES7 293 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 CERS2Q96G23 380 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 GATA5Q9BWX5 397 aaPredicted RBP17.73■□□□□ 0.43
CHTOP-203ENST00000368690 IL22Q9GZX6 179 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 COQ10BQ9H8M1 238 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 VRTNQ9H8Y1 702 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 KIAA1257Q9ULG3 409 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 IL18RAPO95256 599 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 SLC25A27O95847 323 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 PGK2P07205 417 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 MGAT1P26572 445 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 ESRRGP62508 458 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 RHDQ02161 417 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 GBE1Q04446 702 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 CA9Q16790 459 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 TTC30AQ86WT1 665 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 HTR3CQ8WXA8 447 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 ZNF358Q9NW07 568 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 ARHGEF38Q9NXL2 777 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 CDYLQ9Y232 598 aa17.73■□□□□ 0.43
CHTOP-203ENST00000368690 A0A087WXM4 84 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 IGKV6D-21A0A0A0MT36 114 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 A0A1B0GTW7 788 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 CFLARO15519 480 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 DGKIO75912 1065 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 VAPBO95292 243 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 MAP3K6O95382 1288 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 ZNF12P17014 697 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 SDC4P31431 198 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 ATICP31939 592 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 NDST2P52849 883 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 CDH8P55286 799 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 NSUN2Q08J23 767 aaKnown RBP eCLIP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 TRIM25Q14258 630 aaKnown RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 KCTD2Q14681 263 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 IL23RQ5VWK5 629 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 LCLAT1Q6UWP7 414 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 GPR141Q7Z602 305 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 GPR180Q86V85 440 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 TNS4Q8IZW8 715 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 PLD6Q8N2A8 252 aaKnown RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 TMEM79Q9BSE2 394 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 MAF1Q9H063 256 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 WDR55Q9H6Y2 383 aaPredicted RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 NMRAL1Q9HBL8 299 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 NGRNQ9NPE2 291 aaKnown RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 GRID2O43424 1007 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 CD1EP15812 388 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 PTPN1P18031 435 aaKnown RBP17.72■□□□□ 0.43
CHTOP-203ENST00000368690 HMOX2P30519 316 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 ENTPD1P49961 510 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 PTK2BQ14289 1009 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 ELMSAN1Q6PJG2 1045 aa17.72■□□□□ 0.43
CHTOP-203ENST00000368690 TERB1Q8NA31 727 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms