RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 B3GALT6Q96L58 329 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 PLEKHG4BQ96PX9 1271 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CENPOQ9BU64 300 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TUBB6Q9BUF5 446 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 SMARCAD1Q9H4L7 1026 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TCF7L2Q9NQB0 619 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 IGSF5Q9NSI5 407 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 ERAP1Q9NZ08 941 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 SIRPGQ9P1W8 387 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 GJD2Q9UKL4 321 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TNFSF13BQ9Y275 285 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 DTNAQ9Y4J8 743 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CROCCQ5TZA2 2017 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 C5orf42Q9H799 3197 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 ANK1P16157 1881 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 C9IYK1 514 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 H3BRB1 525 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 DYNC1LI2O43237 492 aaPredicted RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 HNRNPRO43390 633 aaKnown RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 RTN3O95197 1032 aaPredicted RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 C2P06681 752 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 POLBP06746 335 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TGFB3P10600 412 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 COX4I1P13073 169 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 VCLP18206 1134 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 NMBRP28336 390 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 GRIA2P42262 883 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 THOP1P52888 689 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 GJA9P57773 515 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 SLC12A1Q13621 1099 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 ITGA7Q13683 1181 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 PDK3Q15120 406 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 DGKDQ16760 1214 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 ARHGAP36Q6ZRI8 547 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 GK5Q6ZS86 529 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 RIOX2Q8IUF8 465 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TRIM42Q8IWZ5 723 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 IQCF2Q8IXL9 164 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 LRRC43Q8N309 656 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 GRIN3AQ8TCU5 1115 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 RNF139Q8WU17 664 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CERS2Q96G23 380 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 GBA2Q9HCG7 927 aaPredicted RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 PRMT7Q9NVM4 692 aaPredicted RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 VANGL2Q9ULK5 521 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 ITM2BQ9Y287 266 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 HTTP42858 3142 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 DNAH14Q0VDD8 3507 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 FAM149AA5PLN7 773 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 USP2O75604 605 aaPredicted RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 NFKB1P19838 968 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CES1P23141 567 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CRHR1P34998 444 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CHRNA4P43681 627 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CCNG1P51959 295 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CWF19L1Q69YN2 538 aaKnown RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 SLC9A4Q6AI14 798 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TWF2Q6IBS0 349 aaKnown RBP9.05□□□□□ -0.96
THBS3-201ENST00000368378 DPP9Q86TI2 863 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 NT5DC4Q86YG4 428 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 NAT16Q8N8M0 369 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 OR9I1Q8NGQ6 314 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 DNAJB3Q8WWF6 145 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 LPPQ93052 612 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 TRPV6Q9H1D0 765 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 CAAP1Q9H8G2 361 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.05□□□□□ -0.96
THBS3-201ENST00000368378 AURKCQ9UQB9 309 aa9.05□□□□□ -0.96
THBS3-201ENST00000368378 SIP14410 1827 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 AURKAO14965 403 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 ZSCAN9O15535 394 aaPredicted RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 GLRA3O75311 464 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SPAG6O75602 509 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SERPINE1P05121 402 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 PIRTP0C851 137 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 ERCC2P18074 760 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 MX2P20592 715 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 GRIA4P48058 902 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 TPI1P60174 286 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 MAXP61244 160 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 CSHL1Q14406 222 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 PRPSAP1Q14558 356 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 TTLL4Q14679 1199 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 GRM3Q14832 879 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 ARL13AQ5H913 290 aaPredicted RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 LCLAT1Q6UWP7 414 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 RBM44Q6ZP01 1051 aaKnown RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 ARMCX2Q7L311 632 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 NET1Q7Z628 596 aaPredicted RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.04□□□□□ -0.96
THBS3-201ENST00000368378 C7orf26Q96N11 449 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SORT1Q99523 831 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 GATA5Q9BWX5 397 aaPredicted RBP9.04□□□□□ -0.96
THBS3-201ENST00000368378 SEZ6LQ9BYH1 1024 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 TLE6Q9H808 572 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 PIGVQ9NUD9 493 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 BFARQ9NZS9 450 aa9.04□□□□□ -0.96
THBS3-201ENST00000368378 SNX13Q9Y5W8 968 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms