RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 ANKS3Q6ZW76 656 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 DEFB128Q7Z7B8 93 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 C10orf82Q8WW14 230 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 IL22Q9GZX6 179 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 NPHS2Q9NP85 383 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 AAR2Q9Y312 384 aaKnown RBP25.39■■□□□ 1.65
CLK2-203ENST00000368361 CDY1Q9Y6F8 540 aa25.39■■□□□ 1.65
CLK2-203ENST00000368361 MKI67P46013 3256 aaKnown RBP25.39■■□□□ 1.65
CLK2-203ENST00000368361 WASH4PA8MWX3 477 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 H7C4K7 107 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 C10orf120Q5SQS8 335 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 ZNF449Q6P9G9 518 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 GBP7Q8N8V2 638 aaPredicted RBP25.38■■□□□ 1.65
CLK2-203ENST00000368361 SPATA17Q96L03 361 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 FCRL5Q96RD9 977 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 TSSK1BQ9BXA7 367 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 GLOD4Q9HC38 313 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 PRDM5Q9NQX1 630 aaPredicted RBP25.38■■□□□ 1.65
CLK2-203ENST00000368361 TMEM51Q9NW97 253 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 MARCH2Q9P0N8 246 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 USH1CQ9Y6N9 552 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 DOCK4Q8N1I0 1966 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 FAM237BA0A1B0GVD1 139 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 TPP1O14773 563 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 HLA-DQB2P05538 268 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 HMBSP08397 361 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 TIGD7Q6NT04 549 aaPredicted RBP25.38■■□□□ 1.65
CLK2-203ENST00000368361 PACS2Q86VP3 889 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 LRRC43Q8N309 656 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 GIPC2Q8TF65 315 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 TXNDC16Q9P2K2 825 aa25.38■■□□□ 1.65
CLK2-203ENST00000368361 DNAJC8O75937 253 aaPredicted RBP25.37■■□□□ 1.65
CLK2-203ENST00000368361 CNTN5O94779 1100 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 UPP2O95045 317 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 CXCL10P02778 98 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 PSEN1P49768 467 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 TRIP4Q15650 581 aaPredicted RBP25.37■■□□□ 1.65
CLK2-203ENST00000368361 FYB2Q5VWT5 728 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 LINC00523Q86TU6 105 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 AGAP2Q99490 1192 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 ZYG11BQ9C0D3 744 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 OLA1Q9NTK5 396 aaKnown RBP25.37■■□□□ 1.65
CLK2-203ENST00000368361 RBM22Q9NW64 420 aaKnown RBP eCLIP25.37■■□□□ 1.65
CLK2-203ENST00000368361 OGDHLQ9ULD0 1010 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 BPTFQ12830 3046 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 GP5P40197 560 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 SMARCB1Q12824 385 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 ALFQ53S48 1182 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 ATP6V0D2Q8N8Y2 350 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 IPMKQ8NFU5 416 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 BTN2A3PQ96KV6 586 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 CPNE1Q99829 537 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 RNF208Q9H0X6 261 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 IPO11Q9UI26 975 aaKnown RBP25.37■■□□□ 1.65
CLK2-203ENST00000368361 SOX13Q9UN79 622 aa25.37■■□□□ 1.65
CLK2-203ENST00000368361 MAGEB16A2A368 324 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 ADAM12O43184 909 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 PSMD3O43242 534 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 F7P08709 466 aaPredicted RBP25.36■■□□□ 1.65
CLK2-203ENST00000368361 ATF6P18850 670 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 BNIP1Q12981 228 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.36■■□□□ 1.65
CLK2-203ENST00000368361 CNPY4Q8N129 248 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 TBL1YQ9BQ87 522 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 CCSER2Q9H7U1 834 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 SAGE1Q9NXZ1 904 aa25.36■■□□□ 1.65
CLK2-203ENST00000368361 SLC12A8A0AV02 714 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 ANXA9O76027 345 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 PDE1BQ01064 536 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 PDE1CQ14123 709 aaPredicted RBP25.35■■□□□ 1.65
CLK2-203ENST00000368361 HSP90AA5PQ58FG0 334 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 RAP1GAP2Q684P5 730 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 UMODL1-AS1Q8N2C9 162 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 FBXO22Q8NEZ5 403 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 ZNF778Q96MU6 729 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 PPARGC1AQ9UBK2 798 aaKnown RBP25.35■■□□□ 1.65
CLK2-203ENST00000368361 CHKBQ9Y259 395 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 TROVE2P10155 538 aaKnown RBP eCLIP25.35■■□□□ 1.65
CLK2-203ENST00000368361 RHOQP17081 205 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 NMBRP28336 390 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 CCDC15Q0P6D6 951 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 FRG1Q14331 258 aaKnown RBP25.35■■□□□ 1.65
CLK2-203ENST00000368361 TEDDM1Q5T9Z0 273 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 FBXL22Q6P050 247 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 LRRC49Q8IUZ0 686 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 ACMSDQ8TDX5 336 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 IGSF8Q969P0 613 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 TMEM248Q9NWD8 314 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 FNIP2Q9P278 1114 aa25.35■■□□□ 1.65
CLK2-203ENST00000368361 MICAL3Q7RTP6 2002 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 IGLV3-10A0A075B6K4 115 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 CCDC78A2IDD5 438 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 AP3B1O00203 1094 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 KLF11O14901 512 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 RPL17P18621 184 aaKnown RBP25.34■■□□□ 1.65
CLK2-203ENST00000368361 TTC31Q49AM3 519 aaPredicted RBP25.34■■□□□ 1.65
CLK2-203ENST00000368361 GRTP1Q5TC63 336 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 STRA8Q7Z7C7 330 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 KCNMB4Q86W47 210 aa25.34■■□□□ 1.65
CLK2-203ENST00000368361 RFWD2Q8NHY2 731 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms