RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 FAM189A1O60320 539 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 C22orf31O95567 290 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 MCF2P10911 925 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 ITGAXP20702 1163 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 IL4RP24394 825 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 PRKCHP24723 683 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 GNL1P36915 607 aaPredicted RBP9.29□□□□□ -0.92
TOP1-201ENST00000361337 APLP1P51693 650 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 FOLH1Q04609 750 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 DCTN2Q13561 401 aaKnown RBP9.29□□□□□ -0.92
TOP1-201ENST00000361337 GRM2Q14416 872 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 SNX17Q15036 470 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 CA9Q16790 459 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 HADHQ16836 314 aaKnown RBP9.29□□□□□ -0.92
TOP1-201ENST00000361337 SDHAF4Q5VUM1 108 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 TMC7Q7Z402 723 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 C14orf80Q86SX3 495 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 METTL23Q86XA0 190 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 PQLC3Q8N755 202 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 GPR152Q8TDT2 470 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 SDCBP2Q9H190 292 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 C1orf21Q9H246 121 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 ZDHHC7Q9NXF8 308 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 PSAT1Q9Y617 370 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 COMMD3-BMI1R4GMX3 469 aa9.29□□□□□ -0.92
TOP1-201ENST00000361337 DNAH12Q6ZR08 3092 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 BPTFQ12830 3046 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PPEF2O14830 753 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 ZBTB14O43829 449 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 TPST1O60507 370 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 FKBP6O75344 327 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 ALDOAP04075 364 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 PRKCGP05129 697 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 TFAP2AP05549 437 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 L1CAMP32004 1257 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 CDH5P33151 784 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 ARL2P36404 184 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 BRCC3P46736 316 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 IDH3AP50213 366 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 COPAP53621 1224 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 MRPS15P82914 257 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 SFSWAPQ12872 951 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 FOXD4Q12950 439 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 MYBPC3Q14896 1274 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 N4BP2L1Q5TBK1 243 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 PGM2L1Q6PCE3 622 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 TMCO2Q7Z6W1 182 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 PATL1Q86TB9 770 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 ARRDC4Q8NCT1 418 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 NDRG1Q92597 394 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 SORT1Q99523 831 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 XYLT2Q9H1B5 865 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 BCAP29Q9UHQ4 241 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 EFR3BQ9Y2G0 817 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SH3GLB1Q9Y371 365 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 TLL2Q9Y6L7 1015 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 NDC80O14777 642 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SEPT4O43236 478 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 DCXO43602 365 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 FOXD2O60548 495 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 CCNT2O60583 730 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 E2F6O75461 281 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SLC1A6P48664 564 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 WASHC5Q12768 1159 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 TRIM16LQ309B1 348 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 EML3Q32P44 896 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 ITPRIPL1Q6GPH6 555 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 GDF6Q6KF10 455 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 SLC27A1Q6PCB7 646 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 C10orf107Q8IVU9 208 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 BRSK2Q8IWQ3 736 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SCUBE3Q8IX30 993 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PLD5Q8N7P1 536 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PIWIL2Q8TC59 973 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 PGBD4Q96DM1 585 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 CENPOQ9BU64 300 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PNPLA8Q9NP80 782 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 GIMAP4Q9NUV9 329 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 THAP1Q9NVV9 213 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 DNAJB4Q9UDY4 337 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 MOSPD1Q9UJG1 213 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 URB1O60287 2271 aaKnown RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 SF3B1O75533 1304 aaKnown RBP eCLIP9.28□□□□□ -0.922e-6■■■■■ 41.3
TOP1-201ENST00000361337 CLDN5O00501 218 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 CHADO15335 359 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 ASLP04424 464 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 THP07101 528 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 OCM2P0CE71 109 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 OCMP0CE72 109 aaPredicted RBP9.28□□□□□ -0.92
TOP1-201ENST00000361337 PCSK6P29122 969 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 CRHR1P34998 444 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 IL1RL1Q01638 556 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 PERM1Q5SV97 790 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 C17orf99Q6UX52 265 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 OTOP2Q7RTS6 562 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 B3GALT6Q96L58 329 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SIGLEC10Q96LC7 697 aa9.28□□□□□ -0.92
TOP1-201ENST00000361337 SEPT5Q99719 369 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms