RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 BRD8Q9H0E9 1235 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 ARHGAP26Q9UNA1 814 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 DOCK1Q14185 1865 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 ERI2A8K979 691 aaKnown RBP11.39□□□□□ -0.59
SSU72-202ENST00000359060 TGDSO95455 350 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 AP2A1O95782 977 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 FKBP1BP68106 108 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 SLC12A1Q13621 1099 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 TBCCQ15814 346 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 KHDC1Q4VXA5 237 aaKnown RBP11.39□□□□□ -0.59
SSU72-202ENST00000359060 SPDYAQ5MJ70 313 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 LAYNQ6UX15 382 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 PRR11Q96HE9 360 aaPredicted RBP11.39□□□□□ -0.59
SSU72-202ENST00000359060 C7orf26Q96N11 449 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 ACE2Q9BYF1 805 aaPredicted RBP11.39□□□□□ -0.59
SSU72-202ENST00000359060 BATF3Q9NR55 127 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 FBXW11Q9UKB1 542 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 CDYLQ9Y232 598 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 GIT1Q9Y2X7 761 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
SSU72-202ENST00000359060 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 PAGE1O75459 146 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 PSMG1O95456 288 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 FLT3LGP49771 235 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 MARC1Q5VT66 337 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 FSTL4Q6MZW2 842 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 CATSPER2Q96P56 530 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 PAAF1Q9BRP4 392 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 ABCC13Q9NSE7 274 aa11.39□□□□□ -0.59
SSU72-202ENST00000359060 ENDOD1O94919 500 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MPOP05164 745 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 RPL9P32969 192 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 AFF1P51825 1210 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 TBX4P57082 545 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 SLC34A1Q06495 639 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 DBN1Q16643 649 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 FAM83EQ2M2I3 478 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 HABP4Q5JVS0 413 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 SH2D4BQ5SQS7 431 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 SMG8Q8ND04 991 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 BHMTQ93088 406 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MS4A4AQ96JQ5 239 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 WDR83Q9BRX9 315 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 EPS15L1Q9UBC2 864 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 COPG2Q9UBF2 871 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 NKX1-2Q9UD57 310 aaPredicted RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 COL11A1P12107 1806 aaPredicted RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 KIF13BQ9NQT8 1826 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 PABPN1LA6NDY0 278 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 ITM2AO43736 263 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 DDHD2O94830 711 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 APOA4P06727 396 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 GFAPP14136 432 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 NMBRP28336 390 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 CD151P48509 253 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 POLE2P56282 527 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 NAB1Q13506 487 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 TAZQ16635 292 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 TRMT5Q32P41 509 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 TMC7Q7Z402 723 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 EFHBQ8N7U6 833 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MAGEC3Q8TD91 643 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 KCNN1Q92952 543 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MARK4Q96L34 752 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 NDNQ99608 321 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 PRDM16Q9HAZ2 1276 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 SUPT7LO94864 414 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 RAB27AP51159 221 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 WASHC5Q12768 1159 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 FAM171A1Q5VUB5 890 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 TIGD7Q6NT04 549 aaPredicted RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 LRRC74BQ6ZQY2 392 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MARK2Q7KZI7 788 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 GPRIN1Q7Z2K8 1008 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 PYDC1Q8WXC3 89 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 KLHL5Q96PQ7 755 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 UBE2OQ9C0C9 1292 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 GPAMQ9HCL2 828 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 PNPLA8Q9NP80 782 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 MCM8Q9UJA3 840 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 FAM95CA0A1B0GW59 222 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 PTGESO14684 152 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 DUSP11O75319 330 aaKnown RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 ASGR1P07306 291 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 EPHA3P29320 983 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 SCNN1AP37088 669 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 TUSC3Q13454 348 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 NFE2Q16621 373 aaPredicted RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 NEPROQ6NW34 567 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 RNF180Q86T96 592 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 DDIASQ8IXT1 998 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 CALML6Q8TD86 181 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 ATP6V1E2Q96A05 226 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 WDR55Q9H6Y2 383 aaPredicted RBP11.38□□□□□ -0.59
SSU72-202ENST00000359060 EURLQ9NYK6 297 aa11.38□□□□□ -0.59
SSU72-202ENST00000359060 ADCY6O43306 1168 aa11.37□□□□□ -0.59
SSU72-202ENST00000359060 SERPINA6P08185 405 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms