RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TIPRLO75663 272 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TPSB2P20231 275 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ATICP31939 592 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NR2C2P49116 596 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 BCAT1P54687 386 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 BST2Q10589 180 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 MSLNQ13421 630 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TPSAB1Q15661 275 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 FAM83EQ2M2I3 478 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ARL13BQ3SXY8 428 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PAN2Q504Q3 1202 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 DALRD3Q5D0E6 543 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CMPK2Q5EBM0 449 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 LRRC8BQ6P9F7 803 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 FBXL19Q6PCT2 694 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CTU1Q7Z7A3 348 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ACMSDQ8TDX5 336 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 AFG1LQ8WV93 481 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 LRTOMTQ8WZ04 291 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 RTKNQ9BST9 563 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 POMKQ9H5K3 350 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NOL11Q9H8H0 719 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TMEM165Q9HC07 324 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 EGFL7Q9UHF1 273 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TNFSF13BQ9Y275 285 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 AP4S1Q9Y587 144 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NR5A2O00482 541 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ADCY6O43306 1168 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 FOXD2O60548 495 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SNNO75324 88 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 GCATO75600 419 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SRP72O76094 671 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 DDHD2O94830 711 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 MT-ND1P03886 318 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 STMN1P16949 149 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ERCC2P18074 760 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CYP3A5P20815 502 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 LMO2P25791 158 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CDH5P33151 784 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 GRIA3P42263 894 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NDUFV1P49821 464 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PSME3P61289 254 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PRKAA1Q13131 559 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 FASTKQ14296 549 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ANO4Q32M45 955 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 TWF2Q6IBS0 349 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 KLC3Q6P597 504 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NAPRTQ6XQN6 538 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PIGZQ86VD9 579 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PNPLA1Q8N8W4 532 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 DNERQ8NFT8 737 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PBXIP1Q96AQ6 731 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 RMND5BQ96G75 393 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SIKE1Q9BRV8 207 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 SLC39A3Q9BRY0 314 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PAIP1Q9H074 479 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 GBA2Q9HCG7 927 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PNPLA8Q9NP80 782 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 DNAJC28Q9NX36 388 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 CHCHD3Q9NX63 227 aaKnown RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 ARHGEF38Q9NXL2 777 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 C6orf203Q9P0P8 240 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-203ENST00000358528 NUDT5Q9UKK9 219 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 KIAA1257Q9ULG3 409 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 PCDHB12Q9Y5F1 795 aa6.69□□□□□ -1.34
CSDE1-203ENST00000358528 STRCQ7RTU9 1775 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SF3B1O75533 1304 aaKnown RBP eCLIP6.68□□□□□ -1.341e-6■■■■■ 28.6
CSDE1-203ENST00000358528 HMX2A2RU54 273 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SOWAHBA6NEL2 793 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ZBTB24O43167 697 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CCNT2O60583 730 aaKnown RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MYL4P12829 197 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CKMT2P17540 419 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 IL4RP24394 825 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 CPOXP36551 454 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 PPARGP37231 505 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 TKTL1P51854 596 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 NEDD8Q15843 81 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 SPANXN3Q5MJ09 141 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 IL23RQ5VWK5 629 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ZNF470Q6ECI4 717 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ILDR2Q71H61 639 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 NXNL1Q96CM4 212 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 QKIQ96PU8 341 aaKnown RBP eCLIP6.68□□□□□ -1.342e-14■■■□□ 16.7
CSDE1-203ENST00000358528 FICDQ9BVA6 458 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 C1orf21Q9H246 121 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 ASB7Q9H672 318 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MORF4L1Q9UBU8 362 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 EMCNQ9ULC0 261 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 HEMK1Q9Y5R4 338 aaPredicted RBP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MRASO14807 208 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 UBDO15205 165 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 NMBRP28336 390 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 GRIA2P42262 883 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MPP1Q00013 466 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 MAP3K10Q02779 954 aa6.68□□□□□ -1.34
CSDE1-203ENST00000358528 NSUN2Q08J23 767 aaKnown RBP eCLIP6.68□□□□□ -1.34
CSDE1-203ENST00000358528 DCTN2Q13561 401 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms