RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 NOVP48745 357 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 N4BP2L1Q5TBK1 243 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 SATL1Q86VE3 508 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 HEXIM2Q96MH2 286 aaKnown RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 CHID1Q9BWS9 393 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 OSGEPQ9NPF4 335 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 MSH4O15457 936 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 VSTM1Q6UX27 236 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 CLVS1Q8IUQ0 354 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 CCNYL1Q8N7R7 359 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 GLB1L3Q8NCI6 653 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 C9orf43Q8TAL5 461 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 PTPRJQ12913 1337 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 LOC100653049A0A140TA62 436 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 KRT34O76011 436 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 EPOP01588 193 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 LBPP18428 481 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 ANKFN1Q8N957 763 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 RPAP3Q9H6T3 665 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 JPH1Q9HDC5 661 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 MLXIPLQ9NP71 852 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 TAS2R13Q9NYV9 303 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 IL20Q9NYY1 176 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 HMGXB4Q9UGU5 601 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 KNDC1Q76NI1 1749 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 hCG_1818297A0A087WSY0 165 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 ALOX15P16050 662 aaPredicted RBP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 AP3S2P59780 193 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 SPATA9Q9BWV2 254 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 PCMTD2Q9NV79 361 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 RNF225M0QZC1 329 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TGFB1I1O43294 461 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SRP72O76094 671 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GLDCP23378 1020 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ADRA1DP25100 572 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 FOXN2P32314 431 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ERICH5Q6P6B1 374 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GALNT7Q86SF2 657 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 DYNLL2Q96FJ2 89 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM121Q9BTD3 319 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KCNH7Q9NS40 1196 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 IVNS1ABPQ9Y6Y0 642 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SLITRK3O94933 977 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 JUNBP17275 347 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RPL3P39023 403 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GMPSP49915 693 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ACOX1Q15067 660 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF181Q2M3W8 571 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 DENND1BQ6P3S1 775 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KLHDC10Q6PID8 442 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RNF34Q969K3 372 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RNF157Q96PX1 679 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CDK5RAP1Q96SZ6 601 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 IMPDH1P20839 514 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NPTX2P47972 431 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 OGFRL1Q5TC84 451 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KCNT2Q6UVM3 1135 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 DCUN1D1Q96GG9 259 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ORAI2Q96SN7 254 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 OLA1Q9NTK5 396 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CALCAP01258 141 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ETS1P14921 441 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PTPN11Q06124 597 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PDZK1Q5T2W1 519 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 AKAP14Q86UN6 197 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 IL1RNP18510 177 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SSTR1P30872 391 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF33BQ06732 778 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TTLL9Q3SXZ7 439 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 IL23RQ5VWK5 629 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 EGFLAMQ63HQ2 1017 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RINLQ6ZS11 566 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TAS2R42Q7RTR8 314 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 TMA16Q96EY4 203 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 APOL2Q9BQE5 337 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 IARS2Q9NSE4 1012 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 LOXHD1Q8IVV2 1947 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 EEF2KO00418 725 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KPNA5O15131 536 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 RRM2P31350 389 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 AGBL1Q96MI9 1066 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 AKAP7Q9P0M2 348 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KIF17Q9P2E2 1029 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 GJA3Q9Y6H8 435 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 BCL9LQ86UU0 1499 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 HCAR3P49019 387 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PTPN21Q16825 1174 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SLC26A9Q7LBE3 791 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CLYBLQ8N0X4 340 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 G3V2T6 193 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PLIN3O60664 434 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PRDX5P30044 214 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 CCT8P50990 548 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 PLOD1Q02809 727 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 KCTD1Q719H9 257 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 METTL3Q86U44 580 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 SLC7A6OSQ96CW6 309 aaPredicted RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 NGRNQ9NPE2 291 aaKnown RBP4.17□□□□□ -1.74
SYNE2-204ENST00000358025 A0A096LPK6 155 aa4.17□□□□□ -1.74
SYNE2-204ENST00000358025 FAM237BA0A1B0GVD1 139 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms