RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 GRIK3Q13003 919 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 USF2Q15853 346 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NDUFA9Q16795 377 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ZNF782Q6ZMW2 699 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OR7G1Q8NGA0 311 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 VMP1Q96GC9 406 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SNX27Q96L92 541 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 QRFPRQ96P65 431 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 EIF2AK1Q9BQI3 630 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 REEP1Q9H902 201 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 E2F8A0AVK6 867 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ACADMP11310 421 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 RFC5P40937 340 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TXKP42681 527 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PCBP1Q15365 356 aaKnown RBP eCLIP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SSX2Q16385 188 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TMEM53Q6P2H8 277 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 UBE2E3Q969T4 207 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TCEAL4Q96EI5 215 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 AP1S3Q96PC3 154 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PI4K2AQ9BTU6 479 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ADAM22Q9P0K1 906 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 RIPK2O43353 540 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NDST1P52848 882 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OXCT1P55809 520 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FMO1Q01740 532 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TBCELQ5QJ74 424 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 LMBR1LQ6UX01 489 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 DEDD2Q8WXF8 326 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CENPNQ96H22 339 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 EPB41L4AQ9HCS5 686 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CPSF3Q9UKF6 684 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ASTN2O75129 1339 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CST8O60676 142 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KRT36O76013 467 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OAZ2O95190 189 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NR3C1P04150 777 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 BMP1P13497 986 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ZNF844Q08AG5 666 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 USP39Q53GS9 565 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 GALNT11Q8NCW6 608 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OR4C6Q8NH72 309 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KLHL6Q8WZ60 621 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 EYA1Q99502 592 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OSBPL7Q9BZF2 842 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KLHL28Q9NXS3 571 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 UBQLN2Q9UHD9 624 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 POLR3HQ9Y535 204 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATP6AP2A0A1C7CYW4 349 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KANTRA0A1W2PQU2 76 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATP6AP2O75787 350 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PSMG1O95456 288 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 HSMCR30P0CW71 290 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATP6AP1LQ52LC2 224 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SIX5Q8N196 739 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TRUB1Q8WWH5 349 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FAM49BQ9NUQ9 324 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CFAP74Q9C0B2 1584 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SSNA1O43805 119 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PRKYO43930 277 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SORBS3O60504 671 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 KCNMA1Q12791 1236 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SKIV2LQ15477 1246 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 MOB2Q70IA6 237 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PARP8Q8N3A8 854 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 GINM1Q9NU53 330 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 DISP3Q9P2K9 1392 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 UBOX5O94941 541 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SDC4P31431 198 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NDUFAF5Q5TEU4 345 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 OPA3Q9H6K4 179 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 TRNAU1APQ9NX07 287 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PALLDQ8WX93 1383 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 URB1O60287 2271 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 FANCAO15360 1455 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PNMA6EA0A0J9YXQ4 647 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CLRN2A0PK11 232 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ATP5J2-PTCD1G3V325 749 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 RBAK-RBAKDNI3L0D1 243 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 PTCD1O75127 700 aaKnown RBP4.74□□□□□ -1.65
SYNE2-203ENST00000357395 AOC1P19801 751 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SLC6A4P31645 630 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 ARSEP51690 589 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 IRAK1BP1Q5VVH5 260 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 SPATA9Q9BWV2 254 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 NRBP2Q9NSY0 501 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 CAMSAP1Q5T5Y3 1602 aa4.74□□□□□ -1.65
SYNE2-203ENST00000357395 IFNA17P01571 189 aa4.73□□□□□ -1.65
SYNE2-203ENST00000357395 RFTN1Q14699 578 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-203ENST00000357395 NUFIP1Q9UHK0 495 aaKnown RBP4.73□□□□□ -1.65
SYNE2-203ENST00000357395 TMA7Q9Y2S6 64 aaKnown RBP4.73□□□□□ -1.65
SYNE2-203ENST00000357395 EMILIN1Q9Y6C2 1016 aa4.73□□□□□ -1.65
SYNE2-203ENST00000357395 BACH1O14867 736 aa4.73□□□□□ -1.65
SYNE2-203ENST00000357395 UCHL3P15374 230 aa4.73□□□□□ -1.65
SYNE2-203ENST00000357395 RPS2P15880 293 aaKnown RBP4.73□□□□□ -1.65
SYNE2-203ENST00000357395 CCNJQ5T5M9 372 aa4.73□□□□□ -1.65
SYNE2-203ENST00000357395 CENPLQ8N0S6 344 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-203ENST00000357395 OR5J2Q8NH18 312 aa4.73□□□□□ -1.65
SYNE2-203ENST00000357395 STON2Q8WXE9 905 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms