RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ZNF655Q8N720 491 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 AGBL3Q8NEM8 1001 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 SPACA7Q96KW9 195 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 TOR4AQ9NXH8 423 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 KANSL3Q9P2N6 904 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 DNAJB2P25686 324 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 QPRTQ15274 297 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 PYDC2Q56P42 97 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 SV2AQ7L0J3 742 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 NET1Q7Z628 596 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 STK40Q8N2I9 435 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 ZKSCAN4Q969J2 545 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 DNAJC1Q96KC8 554 aaKnown RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 TPP1O14773 563 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 NTSR2O95665 410 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 BCAP31P51572 246 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 SPDYCQ5MJ68 293 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 LGI2Q8N0V4 545 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 PCSK9Q8NBP7 692 aaKnown RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 MAGEE2Q8TD90 523 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 VCPIP1Q96JH7 1222 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 EPB41L1Q9H4G0 881 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO28Q9NVF7 368 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 ARL15Q9NXU5 204 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF222Q9UK12 451 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 PLA2R1Q13018 1463 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 ANKDD1BA6NHY2 528 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 PRG2P13727 222 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 TGFBR2P37173 567 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 IFI35P80217 286 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 TROAPQ12815 778 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SMYD1Q8NB12 490 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 RPS6KA6Q9UK32 745 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 AHCYL1O43865 530 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 KHDRBS3O75525 346 aaKnown RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 PAX7P23759 505 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 TNK2Q07912 1038 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 LPIN1Q14693 890 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 PREPLQ4J6C6 727 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 CDKAL1Q5VV42 579 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SMIM5Q71RC9 77 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 BPIFB6Q8NFQ5 453 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 TMEM138Q9NPI0 162 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 PIGNO95427 931 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 ALDH5A1P51649 535 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SQLEQ14534 574 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 RPTNQ6XPR3 784 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 R3HCC1LQ7Z5L2 792 aaKnown RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 DSG4Q86SJ6 1040 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 ZCCHC9Q8N567 271 aaKnown RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 GMCL1P1Q8NEA9 526 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SENP6Q9GZR1 1112 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF232Q9UNY5 417 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 GAKO14976 1311 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SH3BGRLO75368 114 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 RTN3O95197 1032 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SAMD7Q7Z3H4 446 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 PCDH20Q8N6Y1 951 aaKnown RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 SPON1Q9HCB6 807 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 PHF11Q9UIL8 331 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 MAPRE3Q9UPY8 281 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 HPSEQ9Y251 543 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 A0A1W2PRG6 482 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 NKRFO15226 690 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 IDH3BO43837 385 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF37AP17032 561 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 IDH2P48735 452 aaKnown RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 ZNHIT3Q15649 155 aaPredicted RBP15.09■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO42Q6P3S6 717 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 KBTBD2Q8IY47 623 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 AADATQ8N5Z0 425 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 VAT1Q99536 393 aa15.09■□□□□ 0.01
LMX1B-201ENST00000355497 GRIN3BO60391 1043 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 KPNA6O60684 536 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 RARAP10276 462 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 ADSSP30520 456 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 PPP4CP60510 307 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 NR1D2Q14995 579 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 TOMM20Q15388 145 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 SETMARQ53H47 684 aaPredicted RBP15.08■□□□□ 0.01
LMX1B-201ENST00000355497 ARMC12Q5T9G4 340 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 OFCC1Q8IZS5 231 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF606Q8WXB4 792 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 NCKAP1Q9Y2A7 1128 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 TIMM13Q9Y5L4 95 aaPredicted RBP15.08■□□□□ 0.01
LMX1B-201ENST00000355497 HECW2Q9P2P5 1572 aa15.08■□□□□ 0.01
LMX1B-201ENST00000355497 MBD5Q9P267 1494 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 ACSL4O60488 711 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 YBX3P16989 372 aaKnown RBP eCLIP15.08■□□□□ 0
LMX1B-201ENST00000355497 NFKB1P19838 968 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 PLK1P53350 603 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 DNAAF5Q86Y56 855 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 HIPK1Q86Z02 1210 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 KBTBD8Q8NFY9 601 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 SLC38A2Q96QD8 506 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 OSMRQ99650 979 aa15.08■□□□□ 0
LMX1B-201ENST00000355497 CHID1Q9BWS9 393 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms