RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 TTLL3Q9Y4R7 772 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 PTGESO14684 152 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 MSI1O43347 362 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 HLA-DOAP06340 250 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 ITGAXP20702 1163 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 SMARCA1P28370 1054 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 GNA11P29992 359 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 KIF5BP33176 963 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 KPNA1P52294 538 aaPredicted RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 CRYBA2P53672 197 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 PDIA2Q13087 525 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 PDE1CQ14123 709 aaPredicted RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 Q4G0T1 1027 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 TEX44Q53QW1 395 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 PLEKHA7Q6IQ23 1121 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 FAM160B2Q86V87 743 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 EPHX4Q8IUS5 362 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 CENPLQ8N0S6 344 aaPredicted RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 RNF10Q8N5U6 811 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 BHMTQ93088 406 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 PPP1R10Q96QC0 940 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 MYOCQ99972 504 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 INIPQ9NRY2 104 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 DUS2Q9NX74 493 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 MARCH4Q9P2E8 410 aaPredicted RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 NCANO14594 1321 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 NOTCH1P46531 2555 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 LRRD1A4D1F6 860 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 LINC01553A4QN01 128 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 DHRS4L1P0CG22 281 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 RBP3P10745 1247 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 CKBP12277 381 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 TFAMQ00059 246 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 SATB1Q01826 763 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 SEMA3AQ14563 771 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 DSC3Q14574 896 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 RCN1Q15293 331 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 TMC5Q6UXY8 1006 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 PIWIL3Q7Z3Z3 882 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 FRMD5Q7Z6J6 570 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 USP37Q86T82 979 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 TLK2Q86UE8 772 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 BANPQ8N9N5 519 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 XXYLT1Q8NBI6 393 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 SKA1Q96BD8 255 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 TIFAQ96CG3 184 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 NUCKS1Q9H1E3 243 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 ADAMTS10Q9H324 1103 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 SP110Q9HB58 689 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 ITM2CQ9NQX7 267 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 DDX18Q9NVP1 670 aaKnown RBP5.78□□□□□ -1.48
CD47-201ENST00000355354 STK17AQ9UEE5 414 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 SNX9Q9Y5X1 595 aa5.78□□□□□ -1.48
CD47-201ENST00000355354 PRORSD1PA6NEY8 169 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 FBXO21O94952 628 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 KCNH1O95259 989 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CYP1A2P05177 515 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CA4P22748 312 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 RCVRNP35243 200 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 KCNQ1P51787 676 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CLCN7P51798 805 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 THOP1P52888 689 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 BCAR1P56945 870 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CLDN10P78369 228 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CDC16Q13042 620 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 ZBTB17Q13105 803 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 SGO2Q562F6 1265 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 PSRC1Q6PGN9 363 aaPredicted RBP5.77□□□□□ -1.48
CD47-201ENST00000355354 TEX2Q8IWB9 1127 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CCDC51Q96ER9 411 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 PGM2Q96G03 612 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 AK8Q96MA6 479 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 MFSD14AQ96MC6 490 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 LENG8Q96PV6 779 aaPredicted RBP5.77□□□□□ -1.48
CD47-201ENST00000355354 GCNAQ96QF7 691 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 CDT1Q9H211 546 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 TUBB1Q9H4B7 451 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 NOL6Q9H6R4 1146 aaKnown RBP5.77□□□□□ -1.48
CD47-201ENST00000355354 RNF167Q9H6Y7 350 aa5.77□□□□□ -1.48
CD47-201ENST00000355354 TRMT13Q9NUP7 481 aaKnown RBP5.77□□□□□ -1.48
CD47-201ENST00000355354 H3BRJ5 948 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 ADAM12O43184 909 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 DCXO43602 365 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 PROCP04070 461 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 KRT18P05783 430 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 MYL2P10916 166 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 FGF3P11487 239 aaPredicted RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 INSRRP14616 1297 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 RCAN1P53805 252 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 DEFB103AP81534 67 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 MYL7Q01449 175 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 OCRLQ01968 901 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 CENPCQ03188 943 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 ZP2Q05996 745 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 NFX1Q12986 1120 aaKnown RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 CLEC16AQ2KHT3 1053 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 CCDC14Q49A88 953 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 LACTB2Q53H82 288 aaPredicted RBP5.77□□□□□ -1.49
CD47-201ENST00000355354 CCDC181Q5TID7 509 aa5.77□□□□□ -1.49
CD47-201ENST00000355354 XKR5Q6UX68 686 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms