RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SLC6A14Q9UN76 642 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 APOBEC2Q9Y235 224 aaKnown RBP8.49□□□□□ -1.05
CD44-205ENST00000352818 ATP8A1Q9Y2Q0 1164 aa8.49□□□□□ -1.05
CD44-205ENST00000352818 NF1P21359 2839 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 THADAQ6YHU6 1953 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 TNRC6BQ9UPQ9 1833 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 APOC4-APOC2K7ER74 178 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 SMAPO00193 183 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 TRDMT1O14717 391 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 GABRDO14764 452 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 XPO1O14980 1071 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 HUS1O60921 280 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 TADA2AO75478 443 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 SEC24AO95486 1093 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 APOC2P02655 101 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CFIP05156 583 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 HNRNPLP14866 589 aaKnown RBP eCLIP8.48□□□□□ -1.05
CD44-205ENST00000352818 NR1D1P20393 614 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 RPL9P32969 192 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 ACTN2P35609 894 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 GNL1P36915 607 aaPredicted RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 IL12RB1P42701 662 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 ARSEP51690 589 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 ITGA8P53708 1063 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 LILRA4P59901 499 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 ADCY2Q08462 1091 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 SNX1Q13596 522 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 BYSLQ13895 437 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 PDK2Q15119 407 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 ATP13A4Q4VNC1 1196 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 C4orf17Q53FE4 359 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 HIST2H2BCQ6DN03 193 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 TRNP1Q6NT89 227 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 HIBCHQ6NVY1 386 aaPredicted RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 PMF1Q6P1K2 205 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CYP4V2Q6ZWL3 525 aaPredicted RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 C11orf74Q86VG3 221 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 ADGRF2Q8IZF7 708 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 TMEM86AQ8N2M4 240 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 EMC1Q8N766 993 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 C12orf29Q8N999 325 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 RPLP0P6Q8NHW5 317 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 UBA3Q8TBC4 463 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 BAHD1Q8TBE0 780 aaPredicted RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 RXFP2Q8WXD0 754 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 RLN3Q8WXF3 142 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 TTC9Q92623 222 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CENPIQ92674 756 aaPredicted RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 TLCD1Q96CP7 247 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 PGM2Q96G03 612 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CCDC114Q96M63 670 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 KLHL11Q9NVR0 708 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 SHOC2Q9UQ13 582 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 SF3B1O75533 1304 aaKnown RBP eCLIP8.48□□□□□ -1.058e-6■■■■■ 107
CD44-205ENST00000352818 SPENQ96T58 3664 aaKnown RBP8.48□□□□□ -1.05
CD44-205ENST00000352818 KNTC1P50748 2209 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 CABIN1Q9Y6J0 2220 aa8.48□□□□□ -1.05
CD44-205ENST00000352818 PLK4O00444 970 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ARHGAP33O14559 1287 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 DNALI1O14645 258 aaPredicted RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 ZNF197O14709 1029 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 MDM4O15151 490 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 PAPSS1O43252 624 aaPredicted RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 RIPK2O43353 540 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 TCEA3O75764 348 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 SERPINF2P08697 491 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ABHD2P08910 425 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 PDGFRAP16234 1089 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 SDC4P31431 198 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 LHX1P48742 406 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 CXADRP78310 365 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 PDE4CQ08493 712 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 CBLBQ13191 982 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 SLC14A1Q13336 389 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 TFDP2Q14188 446 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 MORF4L2Q15014 288 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 NOMO1Q15155 1222 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 CCDC14Q49A88 953 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 BOLA3Q53S33 107 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ZFYVE27Q5T4F4 411 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 IZUMO3Q5VZ72 239 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 LEKR1Q6ZMV7 388 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 PDZD4Q76G19 769 aaPredicted RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 OSTM1Q86WC4 334 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 YAF2Q8IY57 180 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ZCCHC9Q8N567 271 aaKnown RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 B3GALNT2Q8NCR0 500 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 MDGA1Q8NFP4 955 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 KCTD13Q8WZ19 329 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 FAF2Q96CS3 445 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 PEBP4Q96S96 227 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 CAPS2Q9BXY5 557 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 LRRC3Q9BY71 257 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ROPN1BQ9BZX4 212 aaPredicted RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 STMN4Q9H169 189 aaPredicted RBP8.47□□□□□ -1.05
CD44-205ENST00000352818 DPEP3Q9H4B8 488 aa8.47□□□□□ -1.05
CD44-205ENST00000352818 ZWILCHQ9H900 591 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms