RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 PRPSAP1Q14558 356 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 MUM1Q2TAK8 710 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 LRRC74BQ6ZQY2 392 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 LINC00523Q86TU6 105 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 DQX1Q8TE96 717 aaKnown RBP22.56■■□□□ 1.2
UPF3A-201ENST00000351487 SOCS4Q8WXH5 440 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 MTG1Q9BT17 334 aaPredicted RBP22.56■■□□□ 1.2
UPF3A-201ENST00000351487 TRIM62Q9BVG3 475 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 DMAP1Q9NPF5 467 aaPredicted RBP22.56■■□□□ 1.2
UPF3A-201ENST00000351487 CHRAC1Q9NRG0 131 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 C20orf96Q9NUD7 363 aaPredicted RBP22.56■■□□□ 1.2
UPF3A-201ENST00000351487 ZNF212Q9UDV6 495 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 SLC7A8Q9UHI5 535 aa22.56■■□□□ 1.2
UPF3A-201ENST00000351487 G3V2L1 256 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 DUSP11O75319 330 aaKnown RBP22.55■■□□□ 1.2
UPF3A-201ENST00000351487 CIB2O75838 187 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 JCHAINP01591 159 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 VPS39Q96JC1 886 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 PKMYT1Q99640 499 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 THTPAQ9BU02 230 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 KIFC1Q9BW19 673 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 NSMCE4AQ9NXX6 385 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 TMEM114B3SHH9 223 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 C2P06681 752 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 C6orf222P0C671 652 aaPredicted RBP22.55■■□□□ 1.2
UPF3A-201ENST00000351487 ACTR3P61158 418 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 TAF1CQ15572 869 aaPredicted RBP22.55■■□□□ 1.2
UPF3A-201ENST00000351487 C6orf163Q5TEZ5 329 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 GDF6Q6KF10 455 aaPredicted RBP22.55■■□□□ 1.2
UPF3A-201ENST00000351487 CNTD1Q8N815 330 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 APOL2Q9BQE5 337 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 CDY1Q9Y6F8 540 aa22.55■■□□□ 1.2
UPF3A-201ENST00000351487 E2F8A0AVK6 867 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 H2AFYO75367 372 aaKnown RBP22.54■■□□□ 1.2
UPF3A-201ENST00000351487 CTSHP09668 335 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 BDNFP23560 247 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 MGAT3Q09327 533 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 RIPOR1Q6ZS17 1223 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 CELF6Q96J87 481 aaKnown RBP22.54■■□□□ 1.2
UPF3A-201ENST00000351487 PANX3Q96QZ0 392 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 GPR22Q99680 433 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 CAB39LQ9H9S4 337 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 ARHGEF38Q9NXL2 777 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 PCNTO95613 3336 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 NMBRP28336 390 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 MXRA7P84157 204 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 IRF9Q00978 393 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 DLG2Q15700 870 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 PDPK2PQ6A1A2 396 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 TRIM68Q6AZZ1 485 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 SERINC5Q86VE9 423 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 MID2Q9UJV3 735 aa22.54■■□□□ 1.2
UPF3A-201ENST00000351487 GPR182O15218 404 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 SMNDC1O75940 238 aaKnown RBP eCLIP22.53■■□□□ 1.21e-7■■■□□ 15.1
UPF3A-201ENST00000351487 CCNCP24863 283 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 HOXC13P31276 330 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 METTL23Q86XA0 190 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 LMNTD2Q8IXW0 634 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 SREK1Q8WXA9 508 aaKnown RBP22.53■■□□□ 1.2
UPF3A-201ENST00000351487 CLPTM1LQ96KA5 538 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 NMRAL1Q9HBL8 299 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 IARS2Q9NSE4 1012 aaKnown RBP22.53■■□□□ 1.2
UPF3A-201ENST00000351487 IRAK2O43187 625 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 ZNF623O75123 536 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 APOA4P06727 396 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 TPH1P17752 444 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 COPAP53621 1224 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 ANO4Q32M45 955 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 ANO7Q6IWH7 933 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 NAPRTQ6XQN6 538 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 MYLK4Q86YV6 388 aaPredicted RBP22.53■■□□□ 1.2
UPF3A-201ENST00000351487 DTX3LQ8TDB6 740 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 RNF34Q969K3 372 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 CDH19Q9H159 772 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 RHOJQ9H4E5 214 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 TMLHEQ9NVH6 421 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 UBP1Q9NZI7 540 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 DNAJB4Q9UDY4 337 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 ANGPTL2Q9UKU9 493 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 DSEQ9UL01 958 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 ANKRD6Q9Y2G4 727 aa22.53■■□□□ 1.2
UPF3A-201ENST00000351487 AAR2Q9Y312 384 aaKnown RBP22.53■■□□□ 1.2
UPF3A-201ENST00000351487 A0A088AWK7 358 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 TRIM13O60858 407 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 F7P08709 466 aaPredicted RBP22.52■■□□□ 1.2
UPF3A-201ENST00000351487 CDC25CP30307 473 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 HTR7P34969 479 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 BRMS1LQ5PSV4 323 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 LCA5Q86VQ0 697 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 ZC3HC1Q86WB0 502 aaKnown RBP22.52■■□□□ 1.2
UPF3A-201ENST00000351487 ARHGAP12Q8IWW6 846 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 RDH11Q8TC12 318 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 HAPLN3Q96S86 360 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 AGO3Q9H9G7 860 aaKnown RBP22.52■■□□□ 1.2
UPF3A-201ENST00000351487 GPAMQ9HCL2 828 aa22.52■■□□□ 1.2
UPF3A-201ENST00000351487 M0QZQ0 153 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 B3GAT3O94766 335 aa22.51■■□□□ 1.19
UPF3A-201ENST00000351487 RPLP2P05387 115 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms