RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PTBP2Q9UKA9 531 aaKnown RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TCAF1Q9Y4C2 921 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TESMINQ9Y4I5 508 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 NRP1O14786 923 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 MAN1A2O60476 641 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 DLGAP3O95886 979 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PSMC2P35998 433 aaKnown RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 CRY2Q49AN0 593 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 EPC2Q52LR7 807 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TEDDM1Q5T9Z0 273 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 CHSY3Q70JA7 882 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 KYQ8NBH2 561 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SLC44A5Q8NCS7 719 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 HAS1Q92839 578 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 GLMNQ92990 594 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 RCN3Q96D15 328 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PPP1R36Q96LQ0 422 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 WDR12Q9GZL7 423 aaKnown RBP10.85□□□□□ -0.67
CAPN3-203ENST00000349748 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 MTRRQ9UBK8 725 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 AP4E1Q9UPM8 1137 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 NFASCO94856 1347 aa10.85□□□□□ -0.67
CAPN3-203ENST00000349748 A8MV72 311 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 FAM155AB1AL88 458 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ACOT8O14734 319 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 PPEF1O14829 653 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ACOX3O15254 700 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 AMHP03971 560 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 BMP4P12644 408 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ICAM2P13598 275 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ME2P23368 584 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ARRB2P32121 409 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 GPD2P43304 727 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 SLC1A6P48664 564 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 TNNI2P48788 182 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 SEPHS1P49903 392 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ZNF132P52740 706 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 TMBIM6P55061 237 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 GBE1Q04446 702 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 C19orf57Q0VDD7 668 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 GRSF1Q12849 480 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 INSCQ1MX18 579 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 FASTKD1Q53R41 847 aaKnown RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 PAGE2BQ5JRK9 111 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 FNIP1Q8TF40 1166 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 CYGBQ8WWM9 190 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 VRTNQ9H8Y1 702 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 UBA2Q9UBT2 640 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 PRPF19Q9UMS4 504 aaKnown RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 KAT6AQ92794 2004 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 CNTNAP2Q9UHC6 1331 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 A0A0X1KG70 313 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 C12orf71A8MTZ7 269 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 H0YJX3 145 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 TRIM77I1YAP6 450 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 NPR1P16066 1061 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 EEF1B2P24534 225 aaKnown RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 CYP2C18P33260 490 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 POLD2P49005 469 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 GRM4Q14833 912 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 POU6F1Q14863 301 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 SPARTQ8N0X7 666 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 AGR3Q8TD06 166 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 CPT1BQ92523 772 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 DLG3Q92796 817 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 DMRTB1Q96MA1 342 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 DEPDC7Q96QD5 511 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 SOX17Q9H6I2 414 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 ABCB10Q9NRK6 738 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 NUDT5Q9UKK9 219 aa10.84□□□□□ -0.67
CAPN3-203ENST00000349748 CAB39Q9Y376 341 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-203ENST00000349748 A0A0G2JMP0 313 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 A0A1W2PQ72 361 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CXorf49A8MYA2 514 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 KBTBD13C9JR72 458 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 DLGAP1O14490 977 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ACSL4O60488 711 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 GPC4O75487 556 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 TIPRLO75663 272 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 TMEM63AO94886 807 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 GZMAP12544 262 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 ELK3P41970 407 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 LEPRP48357 1165 aaKnown RBP10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SLC12A3P55017 1021 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 SNTA1Q13424 505 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CCDC14Q49A88 953 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 DCUN1D2Q6PH85 259 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 CYP2R1Q6VVX0 501 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 IDO2Q6ZQW0 420 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 NDUFAF2Q8N183 169 aa10.83□□□□□ -0.68
CAPN3-203ENST00000349748 MFSD4AQ8N468 514 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms