RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 DEFB106AQ8N104 65 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 ATP6V0D2Q8N8Y2 350 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 CDCA5Q96FF9 252 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 WDR12Q9GZL7 423 aaKnown RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 MUC3BQ9H195 1237 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 OLA1Q9NTK5 396 aaKnown RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 CACNA2D2Q9NY47 1150 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 UBP1Q9NZI7 540 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 XRN1Q8IZH2 1706 aaKnown RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 M0R2N6 131 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 NCAM2O15394 837 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 LIASO43766 372 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 NFICP08651 508 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 ENO2P09104 434 aaPredicted RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 IFNA8P32881 189 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 LSM3P62310 102 aaKnown RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 C15orf59Q2T9L4 293 aaPredicted RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 LDLRAP1Q5SW96 308 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 ACO2Q99798 780 aaKnown RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 C9orf16Q9BUW7 83 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 GPRC5DQ9NZD1 345 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 FAM8A1Q9UBU6 413 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 DRG1Q9Y295 367 aaKnown RBP15.74■□□□□ 0.11
SRPK1-201ENST00000346162 GLRBP48167 497 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 TRAF3Q13114 568 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 SPRED3Q2MJR0 410 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 TTC30AQ86WT1 665 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 CYP4X1Q8N118 509 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 HASPINQ8TF76 798 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 EDEM1Q92611 657 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 KLHL32Q96NJ5 620 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 TMEM109Q9BVC6 243 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 CHST12Q9NRB3 414 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 LATS2Q9NRM7 1088 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 VPS45Q9NRW7 570 aa15.74■□□□□ 0.11
SRPK1-201ENST00000346162 CASTOR2A6NHX0 329 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 KCNK1O00180 336 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 CCNB1P14635 433 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 TKTP29401 623 aaKnown RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 LSAMPQ13449 338 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 ERI1Q8IV48 349 aaKnown RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 RASGEF1CQ8N431 466 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 SFRP1Q8N474 314 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 ADCY4Q8NFM4 1077 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 YDJCA8MPS7 323 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 STX7O15400 261 aaKnown RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 ASS1P00966 412 aaKnown RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 DGCR6Q14129 220 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 ENTPD7Q9NQZ7 604 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 RAB26Q9ULW5 256 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 RIPK3Q9Y572 518 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 NALCNQ8IZF0 1738 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 KCPQ6ZWJ8 1503 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 MYPNQ86TC9 1320 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 ZSCAN9O15535 394 aaPredicted RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 AVPR1AP37288 418 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 HALP42357 657 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 ABL2P42684 1182 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 NR2C2P49116 596 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 MMRN1Q13201 1228 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 AGKQ53H12 422 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 AGAP9Q5VTM2 703 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 MAP1SQ66K74 1059 aaPredicted RBP15.73■□□□□ 0.11
SRPK1-201ENST00000346162 SCARA3Q6AZY7 606 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 KIAA0319LQ8IZA0 1049 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 BLOC1S5Q8TDH9 187 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 VANGL2Q9ULK5 521 aa15.73■□□□□ 0.11
SRPK1-201ENST00000346162 PIAS1O75925 651 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 RECQL4O94761 1208 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 MYL4P12829 197 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 MAGP20916 626 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 IL12AP29459 219 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 GSSP48637 474 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 CHRNB3Q05901 458 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 CXorf21Q9HAI6 301 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 PIH1D1Q9NWS0 290 aaKnown RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 LSM7Q9UK45 103 aaKnown RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 A0A1W2PPM1 405 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 C2orf71A6NGG8 1288 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 SUPT3HB4E1H0 165 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 TAS2R40P59535 323 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 SLC35G1Q2M3R5 365 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 ABRAXAS1Q6UWZ7 409 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 RNF180Q86T96 592 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 PALB2Q86YC2 1186 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 TDRD5Q8NAT2 981 aaKnown RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 HELQQ8TDG4 1101 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 WDR41Q9HAD4 459 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 MKL2Q9ULH7 1088 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 RUVBL2Q9Y230 463 aaKnown RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 ACOT9Q9Y305 439 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 EVPLLA8MZ36 301 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 PSMD12O00232 456 aaPredicted RBP15.72■□□□□ 0.11
SRPK1-201ENST00000346162 SUPT7LO94864 414 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 SERPINA6P08185 405 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 KCNK10P57789 538 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 KRT72Q14CN4 511 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 EEF1DP3Q658K8 133 aa15.72■□□□□ 0.11
SRPK1-201ENST00000346162 ZNF572Q7Z3I7 529 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms