RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 CPT1BQ92523 772 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 ANKRD7Q92527 254 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 MUC3BQ9H195 1237 aa14.2□□□□□ -0.14
PMS1-201ENST00000342075 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
PMS1-201ENST00000342075 CBX4O00257 560 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 HTR7P34969 479 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 RHBDF2Q6PJF5 856 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 VITQ6UXI7 678 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 C12orf40Q86WS4 652 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 CELF5Q8N6W0 485 aaKnown RBP14.19□□□□□ -0.14
PMS1-201ENST00000342075 SNF8Q96H20 258 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 GAS2L1Q99501 681 aaPredicted RBP14.19□□□□□ -0.14
PMS1-201ENST00000342075 BBS2Q9BXC9 721 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 FRMD8P1Q9BZ68 369 aaPredicted RBP14.19□□□□□ -0.14
PMS1-201ENST00000342075 ETNK1Q9HBU6 452 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 LMCD1Q9NZU5 365 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 CDH7Q9ULB5 785 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 MYO10Q9HD67 2058 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 CLDN11O75508 207 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 LUC7L3O95232 432 aaKnown RBP14.19□□□□□ -0.14
PMS1-201ENST00000342075 CCNB1P14635 433 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 SERINC3Q13530 473 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 SPARCL1Q14515 664 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 PID1Q7Z2X4 250 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 HJURPQ8NCD3 748 aaPredicted RBP14.19□□□□□ -0.14
PMS1-201ENST00000342075 ATG2BQ96BY7 2078 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 RTP4Q96DX8 246 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 EXOC2Q96KP1 924 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 GUCD1Q96NT3 240 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 ZNF446Q9NWS9 450 aa14.19□□□□□ -0.14
PMS1-201ENST00000342075 KLHL8Q9P2G9 620 aaPredicted RBP14.19□□□□□ -0.14
PMS1-201ENST00000342075 MUSKO15146 869 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 AVILO75366 819 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 HLA-DQB2P05538 268 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 HOXB8P17481 243 aaPredicted RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 MX2P20592 715 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 HLA-FP30511 346 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 STIP1P31948 543 aaKnown RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 LMNB2Q03252 620 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 IHHQ14623 411 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 PRPF38BQ5VTL8 546 aaKnown RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 CCDC25Q86WR0 208 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 SFTPA1Q8IWL2 248 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 SPATA22Q8NHS9 363 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 RUNDC3BQ96NL0 473 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 SP110Q9HB58 689 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 DUS2Q9NX74 493 aaKnown RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 FEZ2Q9UHY8 353 aaPredicted RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 A0A0A0MRY4 1105 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 GRXCR2A6NFK2 248 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 USP12O75317 370 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 MT-CO1P00395 513 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 TYRP14679 529 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 NFKB1P19838 968 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 MAPKAPK2P49137 400 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 NDST2P52849 883 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 LMAN2Q12907 356 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 RNASEH2BQ5TBB1 312 aaKnown RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 BZW1Q7L1Q6 419 aaKnown RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 SPATA13Q96N96 652 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 ATP13A1Q9HD20 1204 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 SPHK2Q9NRA0 654 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 ABCB8Q9NUT2 735 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 GTSE1Q9NYZ3 720 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 INTS6Q9UL03 887 aaKnown RBP14.18□□□□□ -0.14
PMS1-201ENST00000342075 TBC1D30Q9Y2I9 924 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 COL4A3Q01955 1670 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 F5P12259 2224 aa14.18□□□□□ -0.14
PMS1-201ENST00000342075 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 K7ERQ8 282 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 DNALI1O14645 258 aaPredicted RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 LATS1O95835 1130 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 CYP17A1P05093 508 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 APRTP07741 180 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 PFKLP17858 780 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 CTSOP43234 321 aaPredicted RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 KDELC2Q7Z4H8 507 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 CPXM2Q8N436 756 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 LZTR1Q8N653 840 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 AENQ8WTP8 325 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 IRF7Q92985 503 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 ART4Q93070 314 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 ANAPC5Q9UJX4 755 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 DYNC1I1O14576 645 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 MT-CYBP00156 380 aaPredicted RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 LAMP2P13473 410 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 ARF5P84085 180 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 FASTKD3Q14CZ7 662 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 EML3Q32P44 896 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 BPIFB1Q8TDL5 484 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 RPL10LQ96L21 214 aaKnown RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 FEM1AQ9BSK4 669 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 VPS28Q9UK41 221 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
PMS1-201ENST00000342075 C5orf60A6NFR6 353 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 ARHGAP42A6NI28 874 aa14.17□□□□□ -0.14
PMS1-201ENST00000342075 GCATO75600 419 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms