RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 DNAH12Q6ZR08 3092 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 DNAJC25-GNG10A0A024R161 153 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 C1orf232A0A0U1RR37 186 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 K7ERI5 159 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 NOP56O00567 594 aaKnown RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 KLHL2O95198 593 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 CYP1A2P05177 515 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ZNF182P17025 639 aaPredicted RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 CTRB1P17538 263 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ITGAXP20702 1163 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 IDUAP35475 653 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ESRRGP62508 458 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 CDK18Q07002 472 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 CAPSQ13938 189 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 TARBP2Q15633 366 aaKnown RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 PERM1Q5SV97 790 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ATAD3BQ5T9A4 648 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 CTRB2Q6GPI1 263 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 KIAA2013Q8IYS2 634 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 DEFB107AQ8IZN7 70 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.09□□□□□ -0.47
RTN3-203ENST00000341307 CCDC33Q8N5R6 958 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ZNF420Q8TAQ5 688 aaPredicted RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 PEX13Q92968 403 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 ZUFSPQ96AP4 578 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 C8orf48Q96LL4 319 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 C7orf26Q96N11 449 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 FAM111AQ96PZ2 611 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 GPR20Q99678 358 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 AGPAT1Q99943 283 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 CLSTN3Q9BQT9 956 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 FRMD8Q9BZ67 464 aaPredicted RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 CXorf21Q9HAI6 301 aa12.09□□□□□ -0.47
RTN3-203ENST00000341307 MOV10Q9HCE1 1003 aaKnown RBP12.09□□□□□ -0.47
RTN3-203ENST00000341307 MANSC4A6NHS7 340 aaPredicted RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 SDR42E2A6NKP2 422 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 TNPO2O14787 897 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 SNAP91O60641 907 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 TGM1P22735 817 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 HPCAL1P37235 193 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 PGS1Q32NB8 556 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ZNF618Q5T7W0 954 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 GPR107Q5VW38 600 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 DCP2Q8IU60 420 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 BTBD6Q96KE9 485 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 SPATA33Q96N06 139 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 PKP2Q99959 881 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 TMEM8AQ9HCN3 771 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ARMC1Q9NVT9 282 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 GOLGA8MH3BSY2 632 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 CCRL2O00421 344 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 PLOD2O00469 737 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 KLF11O14901 512 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 TSPAN1O60635 241 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ALOX5P09917 674 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 TGFB3P10600 412 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 KITP10721 976 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 GRIA3P42263 894 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 NAMPTP43490 491 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 COPAP53621 1224 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 EIF3EP60228 445 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 MRPS22P82650 360 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 CELF3Q5SZQ8 465 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 GLRX5Q86SX6 157 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ZNF598Q86UK7 904 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 ZC3H7AQ8IWR0 971 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 PCDHB18PQ96TA0 734 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 NPLQ9BXD5 320 aaPredicted RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 WDR6Q9NNW5 1121 aaKnown RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 PNPLA3Q9NST1 481 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 NRBP2Q9NSY0 501 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 RAB20Q9NX57 234 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 MARCOQ9UEW3 520 aaPredicted RBP12.08□□□□□ -0.48
RTN3-203ENST00000341307 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ANGPTL3Q9Y5C1 460 aa12.08□□□□□ -0.48
RTN3-203ENST00000341307 ARHGEF37A1IGU5 675 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 ZBTB42B2RXF5 422 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 PTPN1P18031 435 aaKnown RBP12.07□□□□□ -0.48
RTN3-203ENST00000341307 TNNI1P19237 187 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 GARTP22102 1010 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 GRK2P25098 689 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 PHC1P78364 1004 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 IFITM3Q01628 133 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
RTN3-203ENST00000341307 PEX6Q13608 980 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 TAF1CQ15572 869 aaPredicted RBP12.07□□□□□ -0.48
RTN3-203ENST00000341307 NPTX1Q15818 432 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 FAM160B1Q5W0V3 765 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 KBTBD7Q8WVZ9 684 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 TRIB2Q92519 343 aa12.07□□□□□ -0.48
RTN3-203ENST00000341307 ACAP3Q96P50 834 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms