RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CLTBP09497 229 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 GRIK3Q13003 919 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 PAN2Q504Q3 1202 aaKnown RBP16.65■□□□□ 0.26
LITAF-201ENST00000339430 FAM91A1Q658Y4 838 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 PIWIL2Q8TC59 973 aaKnown RBP16.65■□□□□ 0.26
LITAF-201ENST00000339430 NAT9Q9BTE0 207 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 CCDC106Q9BWC9 280 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 FBXW11Q9UKB1 542 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 RPL26L1Q9UNX3 145 aaKnown RBP16.65■□□□□ 0.26
LITAF-201ENST00000339430 TANC1Q9C0D5 1861 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 MEI4A8MW99 385 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 TPH1P17752 444 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 GP5P40197 560 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 MXRA7P84157 204 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 THOC5Q13769 683 aaKnown RBP16.65■□□□□ 0.26
LITAF-201ENST00000339430 UPP1Q16831 310 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 SPANXN3Q5MJ09 141 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 CERCAMQ5T4B2 595 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 STRA8Q7Z7C7 330 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 WDR75Q8IWA0 830 aaKnown RBP16.65■□□□□ 0.26
LITAF-201ENST00000339430 TNS4Q8IZW8 715 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 DCLK2Q8N568 766 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 CAB39LQ9H9S4 337 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 PRDM16Q9HAZ2 1276 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 SNX15Q9NRS6 342 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 PNPOQ9NVS9 261 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 TMEM161AQ9NX61 479 aa16.65■□□□□ 0.26
LITAF-201ENST00000339430 MRPL42Q9Y6G3 142 aaKnown RBP16.65■□□□□ 0.26
LITAF-201ENST00000339430 TDRD15B5MCY1 1934 aaKnown RBP16.64■□□□□ 0.26
LITAF-201ENST00000339430 AP2A1O95782 977 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 CXCL10P02778 98 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 LTFP02788 710 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 PROCP04070 461 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 ARRB2P32121 409 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 CD68P34810 354 aaPredicted RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 SEMA3BQ13214 749 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.64■□□□□ 0.25
LITAF-201ENST00000339430 PLD6Q8N2A8 252 aaKnown RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 MAB21L3Q8N8X9 362 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 MFSD3Q96ES6 412 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 CELF6Q96J87 481 aaKnown RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 TKTL2Q9H0I9 626 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 LRRC40Q9H9A6 602 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 TAGLN3Q9UI15 199 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 SPECC1L-ADORA2AF8WAN1 911 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 GOLGA8TH3BQL2 631 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 NFKB1P19838 968 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 RPL9P32969 192 aaKnown RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 TUSC3Q13454 348 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 HSP90AA5PQ58FG0 334 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 STXBP5Q5T5C0 1151 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 PDZD4Q76G19 769 aaPredicted RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 TMPRSS6Q8IU80 811 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.64■□□□□ 0.25
LITAF-201ENST00000339430 NTAN1Q96AB6 310 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 SLC9A7Q96T83 725 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 CPNE1Q99829 537 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 MLPHQ9BV36 600 aaPredicted RBP16.64■□□□□ 0.25
LITAF-201ENST00000339430 COLEC11Q9BWP8 271 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 MCOLN1Q9GZU1 580 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 LRRC42Q9Y546 428 aa16.64■□□□□ 0.25
LITAF-201ENST00000339430 INPPL1O15357 1258 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 FBXO21O94952 628 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 PARNO95453 639 aaKnown RBP16.63■□□□□ 0.25
LITAF-201ENST00000339430 PSMG1O95456 288 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 SERPINA6P08185 405 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 GARSP41250 739 aaKnown RBP16.63■□□□□ 0.25
LITAF-201ENST00000339430 ABL2P42684 1182 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 PPIDQ08752 370 aaKnown RBP16.63■□□□□ 0.25
LITAF-201ENST00000339430 NAB1Q13506 487 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 ITGA9Q13797 1035 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 PPP2R5DQ14738 602 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 DLG2Q15700 870 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 VWA5B1Q5TIE3 1220 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 USP33Q8TEY7 942 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 STMN2Q93045 179 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 THTPAQ9BU02 230 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 WDCPQ9H6R7 721 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 CNGB3Q9NQW8 809 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 PRDM5Q9NQX1 630 aaPredicted RBP16.63■□□□□ 0.25
LITAF-201ENST00000339430 BFARQ9NZS9 450 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 COPG2Q9UBF2 871 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 OR12D3Q9UGF7 316 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 PCDHB7Q9Y5E2 793 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.63■□□□□ 0.25
LITAF-201ENST00000339430 LHX1P48742 406 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 IRF9Q00978 393 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 TUBB3Q13509 450 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 ARL13BQ3SXY8 428 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 NOMO2Q5JPE7 1267 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 GRTP1Q5TC63 336 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 FSTL4Q6MZW2 842 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 MAVSQ7Z434 540 aa16.63■□□□□ 0.25
LITAF-201ENST00000339430 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms