RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 PCDH19Q8TAB3 1148 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 GABRG3Q99928 467 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 ACE2Q9BYF1 805 aaPredicted RBP17.12■□□□□ 0.33
SFN-201ENST00000339276 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 TMEM245Q9H330 911 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 PRMT8Q9NR22 394 aaPredicted RBP17.12■□□□□ 0.33
SFN-201ENST00000339276 SLCO3A1Q9UIG8 710 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 SLC25A13Q9UJS0 675 aa17.12■□□□□ 0.33
SFN-201ENST00000339276 PACSIN2Q9UNF0 486 aaPredicted RBP17.12■□□□□ 0.33
SFN-201ENST00000339276 CACNA1IQ9P0X4 2223 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 CKAP5Q14008 2032 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 A0A1W2PQF6 199 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 GALR2O43603 387 aaPredicted RBP17.11■□□□□ 0.33
SFN-201ENST00000339276 ZMPSTE24O75844 475 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 SRPRAP08240 638 aaKnown RBP17.11■□□□□ 0.33
SFN-201ENST00000339276 NDST2P52849 883 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 YBEYP58557 167 aaPredicted RBP17.11■□□□□ 0.33
SFN-201ENST00000339276 ST8SIA6P61647 398 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 ARF5P84085 180 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 E2F5Q15329 346 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 PARP15Q460N3 678 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 ODF2Q5BJF6 829 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 AFMIDQ63HM1 303 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 NCBP2-AS2Q69YL0 99 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 KIAA1211LQ6NV74 962 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 MFSD7Q6UXD7 560 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 PEX26Q7Z412 305 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 ZNF354CQ86Y25 554 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 ARHGAP12Q8IWW6 846 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 KATNAL2Q8IYT4 538 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 PQLC3Q8N755 202 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 HHIPQ96QV1 700 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 MTG2Q9H4K7 406 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 AMFRQ9UKV5 643 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 PYCARDQ9ULZ3 195 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SFN-201ENST00000339276 PCDHA3Q9Y5H8 950 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
SFN-201ENST00000339276 NUP205Q92621 2012 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 TTC34A8MYJ7 566 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 K7ESF4 209 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 PAPSS2O95340 614 aaPredicted RBP17.1■□□□□ 0.33
SFN-201ENST00000339276 MT-CO1P00395 513 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 EPHX1P07099 455 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 SERINC3Q13530 473 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 ANGPT1Q15389 498 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 LEKR1Q6ZMV7 388 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 REXO1L1PQ8IX06 675 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 RNF157Q96PX1 679 aa17.1■□□□□ 0.33
SFN-201ENST00000339276 CCDC66A2RUB6 948 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 ZNF487B1APH4 448 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 K7ERQ8 282 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 DFFAO00273 331 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 ZSCAN12O43309 604 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 KDELR3O43731 214 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 MFSD11O43934 449 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 SRCP12931 536 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 TDGF1P13385 188 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 CDKN2BP42772 138 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 PEX5P50542 639 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
SFN-201ENST00000339276 NUBP1P53384 320 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 CSTF1Q05048 431 aaKnown RBP17.09■□□□□ 0.33
SFN-201ENST00000339276 LLGL1Q15334 1064 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 RETSATQ6NUM9 610 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 SPOCD1Q6ZMY3 1216 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 VSIG1Q86XK7 387 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 SH2D3CQ8N5H7 860 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 LZTR1Q8N653 840 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 KDM1BQ8NB78 822 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 TSTD1Q8NFU3 115 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 EXD1Q8NHP7 514 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 ALG3Q92685 438 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
SFN-201ENST00000339276 HPCAL4Q9UM19 191 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 HS3ST2Q9Y278 367 aa17.09■□□□□ 0.33
SFN-201ENST00000339276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
SFN-201ENST00000339276 TCRBV21S2A2A0A5A6 115 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 ARHGAP42A6NI28 874 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 SMAD6O43541 496 aaKnown RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 ATP9BO43861 1147 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.32
SFN-201ENST00000339276 CD160O95971 181 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 VAV1P15498 845 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 SERPINB6P35237 376 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 NNMTP40261 264 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 PXNP49023 591 aaPredicted RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 SERPINH1P50454 418 aaKnown RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 VASPP50552 380 aaPredicted RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 DNA2P51530 1060 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 DGKEP52429 567 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 DMWDQ09019 674 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 STARD3Q14849 445 aa17.08■□□□□ 0.32
SFN-201ENST00000339276 PAFAH1B3Q15102 231 aaKnown RBP17.08■□□□□ 0.32
SFN-201ENST00000339276 TAZQ16635 292 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms