RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 IKZF4Q9H2S9 585 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 STMN3Q9NZ72 180 aa16.33■□□□□ 0.2
NPHP3-201ENST00000337331 STX7O15400 261 aaKnown RBP16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TGFB3P10600 412 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TBCELQ5QJ74 424 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 NIPAL1Q6NVV3 410 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 UNC45BQ8IWX7 931 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 FAM71AQ8IYT1 594 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 KATNAL2Q8IYT4 538 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 CERS5Q8N5B7 392 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TRPC4APQ8TEL6 797 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 HSD17B14Q9BPX1 270 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 COG4Q9H9E3 785 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 ZFYVE28Q9HCC9 887 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 RIC8BQ9NVN3 520 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TGFB1I1O43294 461 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 DSG3P32926 999 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 POU4F1Q01851 419 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 MRNIPQ6NTE8 343 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 NEK10Q6ZWH5 1172 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TAGAPQ8N103 731 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 ELMOD1Q8N336 334 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TBCBQ99426 244 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 SPATC1LQ9H0A9 340 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 WDR41Q9HAD4 459 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 CYP3A7-CYP3A51PA0A087WV96 503 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 MYO1GB0I1T2 1018 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 ALOX15BO15296 676 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 CLASP2O75122 1294 aaKnown RBP16.32■□□□□ 0.2
NPHP3-201ENST00000337331 IDO1P14902 403 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 CYP3A7P24462 503 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 MTX3Q5HYI7 312 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 HORMAD1Q86X24 394 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 FBXO27Q8NI29 283 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 PTCD3Q96EY7 689 aaKnown RBP16.32■□□□□ 0.2
NPHP3-201ENST00000337331 NCKIPSDQ9NZQ3 722 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 TMEM98Q9Y2Y6 226 aa16.32■□□□□ 0.2
NPHP3-201ENST00000337331 PTGES3LE9PB15 166 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 NME5P56597 212 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 NPY5RQ15761 445 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 PLEKHG4Q58EX7 1191 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 DUS1LQ6P1R4 473 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 CES3Q6UWW8 571 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 CCDC60Q8IWA6 550 aaPredicted RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TMEM221A6NGB7 291 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 ACKR2O00590 384 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TPH1P17752 444 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TUBA4AP68366 448 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 BST2Q10589 180 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 PAGE2BQ5JRK9 111 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 RRM2BQ7LG56 351 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TOR1BO14657 336 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TSC22D2O75157 780 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 APOC2P02655 101 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 GP5P40197 560 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 CSHL1Q14406 222 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 DMC1Q14565 340 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 ZNF846Q147U1 533 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 DHRSXQ8N5I4 330 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 DNERQ8NFT8 737 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 BHMTQ93088 406 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 SNX27Q96L92 541 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 SACM1LQ9NTJ5 587 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 VANGL2Q9ULK5 521 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 SOAT2O75908 522 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 SEMA3DO95025 777 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 CDH2P19022 906 aaPredicted RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TCEA1P23193 301 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 RBL1P28749 1068 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 SEPHS1P49903 392 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TKTL1P51854 596 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 GTF2BQ00403 316 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 FMO1Q01740 532 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 POLD3Q15054 466 aaPredicted RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 MAPRE1Q15691 268 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 KCNT2Q6UVM3 1135 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 MCRS1Q96EZ8 462 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 THUMPD3Q9BV44 507 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 NOL11Q9H8H0 719 aaKnown RBP16.31■□□□□ 0.2
NPHP3-201ENST00000337331 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
NPHP3-201ENST00000337331 TFAP2AP05549 437 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ALOX5P09917 674 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ALOX12P18054 663 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 SLC5A2P31639 672 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ATP6V1E1P36543 226 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 LRRC74AQ0VAA2 488 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 SMU1Q2TAY7 513 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 VWA5B1Q5TIE3 1220 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 LRP10Q7Z4F1 713 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
NPHP3-201ENST00000337331 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
NPHP3-201ENST00000337331 TRPV5Q9NQA5 729 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms