RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CDH9Q9ULB4 789 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CITO14578 2027 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 LINGO3P0C6S8 592 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 HYAL2Q12891 473 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 C1orf94Q6P1W5 598 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 OR2L3Q8NG85 312 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SLC32A1Q9H598 525 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 TSPAN19P0C672 248 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 IL12BP29460 328 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SCNN1GP51170 649 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 NFIXQ14938 502 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 EMC2Q15006 297 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF621Q6ZSS3 439 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 HEPHQ9BQS7 1158 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 MROH8Q9H579 483 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 BPIFA1Q9NP55 256 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ACADSBP45954 432 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SCN1BQ07699 218 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 MAD2L1BPQ15013 274 aaPredicted RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ZCCHC7Q8N3Z6 543 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 PDGFCQ9NRA1 345 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 STX16-NPEPL1H3BU86 382 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 STX16O14662 325 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 RGS10O43665 173 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 PTGER2P43116 358 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 TAS2R50P59544 299 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 KRR1Q13601 381 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 RASGEF1CQ8N431 466 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 GPT2Q8TD30 523 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 DNAJC9Q8WXX5 260 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 SMG7Q92540 1137 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CDCA5Q96FF9 252 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 CELF6Q96J87 481 aaKnown RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
KPNA4-201ENST00000334256 POLMQ9NP87 494 aaPredicted RBP12.86□□□□□ -0.35
KPNA4-201ENST00000334256 O00370 1275 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 SLC9A3R1O14745 358 aaPredicted RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ADH1AP07327 375 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 DNAJC14Q6Y2X3 702 aaPredicted RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PHF21BQ96EK2 531 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.355e-7■■■■□ 21.6
KPNA4-201ENST00000334256 COPS7AQ9UBW8 275 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 AMACRQ9UHK6 382 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 VAMP4O75379 141 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 EPHX1P07099 455 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 AGXTP21549 392 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PSMA4P25789 261 aaKnown RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 CCT8P50990 548 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 SRFBP1Q8NEF9 429 aaKnown RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.351e-7■■■□□ 16.2
KPNA4-201ENST00000334256 MTF2Q9Y483 593 aaPredicted RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 IL1AP01583 271 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ADORA2AP29274 412 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 GTF2H1P32780 548 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 NR6A1Q15406 480 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 EFHC1Q5JVL4 640 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 MRNIPQ6NTE8 343 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 DSN1Q9H410 356 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■□ 20.6
KPNA4-201ENST00000334256 WHRNQ9P202 907 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 SNCAIPQ9Y6H5 919 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 E2F3O00716 465 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ITIH2P19823 946 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 RBMS1P29558 406 aaKnown RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 C2orf76Q3KRA6 126 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 GPR158Q5T848 1215 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 NLGN4YQ8NFZ3 816 aaPredicted RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PJA1Q8NG27 643 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PSMD13Q9UNM6 376 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 URADA6NGE7 173 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 CRTAMO95727 393 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 POU2F2P09086 479 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 CDC25CP30307 473 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PPP2R2BQ00005 443 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 NOGQ13253 232 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PIK3R6Q5UE93 754 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 HERVK_113Q902F9 699 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 SEMA3GQ9NS98 782 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 CIDEBQ9UHD4 219 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 KDM5BQ9UGL1 1544 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ISPDA4D126 451 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PODXLO00592 558 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 FCHO1O14526 889 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 BDNFP23560 247 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ASMTP46597 345 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PEX6Q13608 980 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 CYP2A13Q16696 494 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PLK2Q9NYY3 685 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms