RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 UNKQ9C0B0 810 aaKnown RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 TKTL2Q9H0I9 626 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 TK2O00142 265 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SKIP12755 728 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SP100P23497 879 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 LRPAP1P30533 357 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 DBN1Q16643 649 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 PAN2Q504Q3 1202 aaKnown RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 RNF220Q5VTB9 566 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 IZUMO2Q6UXV1 221 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 RAPH1Q70E73 1250 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 CLEC14AQ86T13 490 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 KCNMB4Q86W47 210 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 HPS6Q86YV9 775 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 GTF3C2Q8WUA4 911 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 WDR55Q9H6Y2 383 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 DNAJC28Q9NX36 388 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 PHGDHO43175 533 aaKnown RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 KLHL2O95198 593 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SBK3P0C264 359 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 MX2P20592 715 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 GARSP41250 739 aaKnown RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 GLRBP48167 497 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 NAB1Q13506 487 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 IRGCQ6NXR0 463 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SPATA6LQ8N4H0 392 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 ISL2Q96A47 359 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 APBA2Q99767 749 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 GATA5Q9BWX5 397 aaPredicted RBP13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SLC39A10Q9ULF5 831 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 SORCS3Q9UPU3 1222 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 PCDHB12Q9Y5F1 795 aa13.69□□□□□ -0.22
TUBA1B-201ENST00000332858 HHLA1C9JL84 531 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 SRGAP2BP0DMP2 458 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 GABRB3P28472 473 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 AVPR1AP37288 418 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 SERPINB8P50452 374 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 ZNF460Q14592 562 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 GRM3Q14832 879 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 DEFB107AQ8IZN7 70 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 NTAN1Q96AB6 310 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 VPS39Q96JC1 886 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 GBA3Q9H227 469 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 PIDD1Q9HB75 910 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 CPA4Q9UI42 421 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 G3BP2Q9UN86 482 aaKnown RBP13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 ENO4A6NNW6 628 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 HSPA4LO95757 839 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 MT-CYBP00156 380 aaPredicted RBP13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 UBTFL6P0CB48 400 aaPredicted RBP13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 ZNF865P0CJ78 1059 aaPredicted RBP13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 ITGAXP20702 1163 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 SCAPQ12770 1279 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 MPP3Q13368 585 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 CCNIQ14094 377 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 PCBP1Q15365 356 aaKnown RBP eCLIP13.68□□□□□ -0.222e-11■■■■□ 20.8
TUBA1B-201ENST00000332858 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 EPGNQ6UW88 154 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 DPF3Q92784 378 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 GATA6Q92908 595 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 SLC9A7Q96T83 725 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 SIKE1Q9BRV8 207 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 NMRAL1Q9HBL8 299 aa13.68□□□□□ -0.22
TUBA1B-201ENST00000332858 CASTOR2A6NHX0 329 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 HAS3O00219 553 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 BUD23O43709 281 aaKnown RBP13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 MPSTP25325 297 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 CRYBB1P53674 252 aaPredicted RBP13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 AP2B1P63010 937 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 C6orf163Q5TEZ5 329 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 PGM2L1Q6PCE3 622 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 CDH19Q9H159 772 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 ANGPTL2Q9UKU9 493 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 NEMP1O14524 444 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 ATP5BP06576 529 aaKnown RBP13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 GALNT2Q10471 571 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 CUL3Q13618 768 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 RAB41Q5JT25 222 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 LPCAT4Q643R3 524 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 SLC26A7Q8TE54 656 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 HDAC11Q96DB2 347 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 TEKT5Q96M29 485 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 LENG8Q96PV6 779 aaPredicted RBP13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 SIK2Q9H0K1 926 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 STN1Q9H668 368 aaKnown RBP13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 S100A14Q9HCY8 104 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 ADAMTS6Q9UKP5 1117 aa13.67□□□□□ -0.22
TUBA1B-201ENST00000332858 JUNP05412 331 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms