RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 ERCC2P18074 760 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 CLCN6P51797 869 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 HADHBP55084 474 aaKnown RBP16.87■□□□□ 0.29
TPM2-201ENST00000329305 CDH6P55285 790 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 SLC20A2Q08357 652 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 SRSF5Q13243 272 aaKnown RBP16.87■□□□□ 0.29
TPM2-201ENST00000329305 PARP15Q460N3 678 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 TMEM139Q8IV31 216 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 MAP7D3Q8IWC1 876 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 UMODL1-AS1Q8N2C9 162 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 SH2D3CQ8N5H7 860 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 CCDC112Q8NEF3 446 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 CALR3Q96L12 384 aaKnown RBP16.87■□□□□ 0.29
TPM2-201ENST00000329305 CCDC114Q96M63 670 aa16.87■□□□□ 0.29
TPM2-201ENST00000329305 MKRN2Q9H000 416 aaKnown RBP16.87■□□□□ 0.29
TPM2-201ENST00000329305 CWC15Q9P013 229 aaKnown RBP16.87■□□□□ 0.29
TPM2-201ENST00000329305 MUC6Q6W4X9 2439 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 CXorf51AA0A1B0GTR3 108 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ZSCAN5CA6NGD5 496 aaPredicted RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 SPOPO43791 374 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ATP9BO43861 1147 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 SIN3BO75182 1162 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ACVRL1P37023 503 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 PLA2G5P39877 138 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 VAV2P52735 878 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 NDST2P52849 883 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 COPAP53621 1224 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 NAP1L1P55209 391 aaKnown RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 DLG2Q15700 870 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ODF2Q5BJF6 829 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ZNF776Q68DI1 518 aaPredicted RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 TXNRD3NBQ6F5E7 133 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 POLNQ7Z5Q5 900 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 LZTR1Q8N653 840 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 KCTD6Q8NC69 237 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ACRBPQ8NEB7 543 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 ACE2Q9BYF1 805 aaPredicted RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 SLC6A17Q9H1V8 727 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 PCDH18Q9HCL0 1135 aa16.86■□□□□ 0.29
TPM2-201ENST00000329305 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 SMG5Q9UPR3 1016 aaKnown RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
TPM2-201ENST00000329305 MUC22E2RYF6 1773 aaPredicted RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 ARHGAP42A6NI28 874 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 RASA4BC9J798 803 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 MAP3K13O43283 966 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 RASA4O43374 803 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 DNTTP04053 509 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 SRCP12931 536 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 GLDCP23378 1020 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 SERPINB6P35237 376 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 P2RY2P41231 377 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 RECQLP46063 649 aaPredicted RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 MRE11P49959 708 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 SERPINH1P50454 418 aaKnown RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 ZBTB16Q05516 673 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 SFSWAPQ12872 951 aaKnown RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 DPYSQ14117 519 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 ELAVL3Q14576 367 aaKnown RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 PDK2Q15119 407 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 ELF2Q15723 593 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 C9orf64Q5T6V5 341 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 LINGO4Q6UY18 593 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 DSG4Q86SJ6 1040 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 METTL3Q86U44 580 aaKnown RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 CACUL1Q86Y37 369 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 RLN3Q8WXF3 142 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 PTPRN2Q92932 1015 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 HMCESQ96FZ2 354 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 CSPG4P5Q96PW8 444 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 PHOX2BQ99453 314 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 CALN1Q9BXU9 219 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 MTG2Q9H4K7 406 aa16.85■□□□□ 0.29
TPM2-201ENST00000329305 MYO18AQ92614 2054 aaKnown RBP16.85■□□□□ 0.29
TPM2-201ENST00000329305 KDELR3O43731 214 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 BNIP3LO60238 219 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 ZMPSTE24O75844 475 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 RHOBTB1O94844 696 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 MT-CO1P00395 513 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 TAS2R40P59535 323 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 ARF5P84085 180 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 KIF5AQ12840 1032 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 LRRC38Q5VT99 294 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 C22orf39Q6P5X5 142 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 SLC36A4Q6YBV0 504 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 CPNE8Q86YQ8 564 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 RHOT1Q8IXI2 618 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 FRS2Q8WU20 508 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 OR8D1Q8WZ84 308 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 ZNF670Q9BS34 389 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 CEP44Q9C0F1 390 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 RSPH9Q9H1X1 276 aaPredicted RBP16.84■□□□□ 0.29
TPM2-201ENST00000329305 GMEB2Q9UKD1 530 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 SCML1Q9UN30 329 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 CYP8B1Q9UNU6 501 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 TFR2Q9UP52 801 aa16.84■□□□□ 0.29
TPM2-201ENST00000329305 INVSQ9Y283 1065 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms