RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 LRRC55Q6ZSA7 311 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 USP50Q70EL3 339 aaPredicted RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 DSG4Q86SJ6 1040 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 LRRTM3Q86VH5 581 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 GPC2Q8N158 579 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 PPM1KQ8N3J5 372 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 TDRD5Q8NAT2 981 aaKnown RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 FNDC5Q8NAU1 212 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 ARRDC4Q8NCT1 418 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 OR7D4Q8NG98 312 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 TEX47Q8TBZ9 253 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 PHF10Q8WUB8 498 aaKnown RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 SLC9A6Q92581 669 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 ARL5BQ96KC2 179 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 MOGAT1Q96PD6 335 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 SORT1Q99523 831 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 TMEM246Q9BRR3 403 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 PACSIN1Q9BY11 444 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 PITHD1Q9GZP4 211 aaPredicted RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 PPA2Q9H2U2 334 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 EFCAB1Q9HAE3 211 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 ERVK-5Q9HDB9 667 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 FANCFQ9NPI8 374 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 POLE3Q9NRF9 147 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 ACOXLQ9NUZ1 547 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 SMOXQ9NWM0 555 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 PAQR5Q9NXK6 330 aaPredicted RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 TXNDC16Q9P2K2 825 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 DNMT3BQ9UBC3 853 aaKnown RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 GTF2IRD1Q9UHL9 959 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 ZNF229Q9UJW7 825 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 CDC14AQ9UNH5 594 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 DIMT1Q9UNQ2 313 aaKnown RBP9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 HCN4Q9Y3Q4 1203 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 TJP1Q07157 1748 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 ANKRD31Q8N7Z5 1873 aa9.44□□□□□ -0.9
NPIPA1-201ENST00000328085 COL11A2P13942 1736 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 EML1O00423 815 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ANGPT2O15123 496 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 TRIM3O75382 744 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 MICAL2O94851 1124 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 TRIM16O95361 564 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 APOA1P02647 267 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 CYP19A1P11511 503 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ITGB6P18564 788 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ABCB4P21439 1286 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 RFX1P22670 979 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 IVDP26440 423 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ERP29P30040 261 aaKnown RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 HOXA1P49639 335 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 NT5C2P49902 561 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 HLCSP50747 726 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 SLC18A2Q05940 514 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 KDSRQ06136 332 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 CBLBQ13191 982 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 SLC39A6Q13433 755 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 TOP3AQ13472 1001 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 RFTN1Q14699 578 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 WDR44Q5JSH3 913 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 BRMS1LQ5PSV4 323 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 C6orf52Q5T4I8 152 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 DCAF12L1Q5VU92 463 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 CREB3L2Q70SY1 520 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 PRSS48Q7RTY5 328 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ZNF571Q7Z3V5 609 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 CTU1Q7Z7A3 348 aaKnown RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 NKAIN4Q8IVV8 208 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 TMEM102Q8N9M5 508 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 OR5H6Q8NGV6 325 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 RSAD2Q8WXG1 361 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 NAP1L4Q99733 375 aaKnown RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ZKSCAN3Q9BRR0 538 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 DHRS4Q9BTZ2 278 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 SLC6A17Q9H1V8 727 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 NOL6Q9H6R4 1146 aaKnown RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 TMEM206Q9H813 350 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ZNF408Q9H9D4 720 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 ERVMER34-1Q9H9K5 563 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 FAM105AQ9NUU6 356 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 PAK1IP1Q9NWT1 392 aaPredicted RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 IL37Q9NZH6 218 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 CNTN3Q9P232 1028 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 DENND2AQ9ULE3 1009 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 VWA7Q9Y334 891 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 NR2E1Q9Y466 385 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
NPIPA1-201ENST00000328085 LAMB1P07942 1786 aa9.42□□□□□ -0.9
NPIPA1-201ENST00000328085 HEG1Q9ULI3 1381 aa9.42□□□□□ -0.9
NPIPA1-201ENST00000328085 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
NPIPA1-201ENST00000328085 SH3D21A4FU49 640 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms