RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CCDC110Q8TBZ0 833 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 CSGALNACT1Q8TDX6 532 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 ZNF419Q96HQ0 510 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 CIPCQ9C0C6 399 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 INTS6Q9UL03 887 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-202ENST00000318007 ARNTLO00327 626 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 MAFKO60675 156 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 STK19P49842 368 aaPredicted RBP15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 OXCT1P55809 520 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 ZBTB17Q13105 803 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 SERINC3Q13530 473 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 PPP1R7Q15435 360 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 GAB4Q2WGN9 574 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 PARP15Q460N3 678 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 SLC45A4Q5BKX6 768 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 CYB5D2Q8WUJ1 264 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 EXOC2Q96KP1 924 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 AGAP3Q96P47 875 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 QKIQ96PU8 341 aaKnown RBP eCLIP15.74■□□□□ 0.114e-24■■■■■ 117.3
PDLIM5-202ENST00000318007 XPO6Q96QU8 1125 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 FAM50BQ9Y247 325 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
PDLIM5-202ENST00000318007 ESYT3A0FGR9 886 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 ILVBLA1L0T0 632 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CCDC188H7C350 402 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 K7ERQ8 282 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 BNIP3LO60238 219 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 GJB3O75712 270 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 MT-CO1P00395 513 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 MX2P20592 715 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CD72P21854 359 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CHRNA3P32297 505 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 MAXP61244 160 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 ITPRIPL2Q3MIP1 535 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 MPP7Q5T2T1 576 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 FAXCQ5TGI0 409 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 AFMIDQ63HM1 303 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 TMEM215Q68D42 235 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 BZW1Q7L1Q6 419 aaKnown RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CCDC89Q8N998 374 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 FIBINQ8TAL6 211 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 HTR3CQ8WXA8 447 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 FBRSL1Q9HCM7 1045 aaKnown RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 KIAA1522Q9P206 1035 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CACNG3O60359 315 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 NEBLO76041 1014 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 ECEL1O95672 775 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 PABPC1P11940 636 aaKnown RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 ARF5P84085 180 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 PPIDQ08752 370 aaKnown RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 SLC10A7Q0GE19 358 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 NR1H3Q13133 447 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 PLEKHG6Q3KR16 790 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 PITRM1Q5JRX3 1037 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 TXNDC11Q6PKC3 985 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 ZNF572Q7Z3I7 529 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CDKL3Q8IVW4 592 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 CCDC13Q8IYE1 715 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 C12orf50Q8NA57 414 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 HDAC11Q96DB2 347 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 MAGEH1Q9H213 219 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 DONSONQ9NYP3 566 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 MARK1Q9P0L2 795 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 VPS51Q9UID3 782 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 HPCAL4Q9UM19 191 aa15.73■□□□□ 0.11
PDLIM5-202ENST00000318007 RNF103O00237 685 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 HOXC11O43248 304 aaPredicted RBP15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 JCHAINP01591 159 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 CLCN6P51797 869 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 ITKQ08881 620 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 PRKD1Q15139 912 aaPredicted RBP15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 ZNF366Q8N895 744 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 ATL2Q8NHH9 583 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 NKD2Q969F2 451 aaPredicted RBP15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 NXPE3Q969Y0 559 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 DPH5Q9H2P9 285 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 DEC1Q9P2X7 70 aa15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 FCF1Q9Y324 198 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-202ENST00000318007 PRRT4C9JH25 899 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 ITGAVP06756 1048 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 CCNB1P14635 433 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 OPRD1P41143 372 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 FNTAP49354 379 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 YBEYP58557 167 aaPredicted RBP15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 ZP2Q05996 745 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 TRADDQ15628 312 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 JAMLQ86YT9 394 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 ETFBKMTQ8IXQ9 262 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 ALLCQ8N6M5 410 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 ALG14Q96F25 216 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 NECAB3Q96P71 396 aaPredicted RBP15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 USP29Q9HBJ7 922 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 HOMER3Q9NSC5 361 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 KLHL8Q9P2G9 620 aaPredicted RBP15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 ASIC3Q9UHC3 531 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 PIAS3Q9Y6X2 628 aa15.71■□□□□ 0.11
PDLIM5-202ENST00000318007 TBC1D3BA6NDS4 549 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms