RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 OXSMQ9NWU1 459 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 VPS28Q9UK41 221 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 CEPT1Q9Y6K0 416 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 ZCWPW2A0A1B0GU75 182 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 SOCS7O14512 581 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 HDAC3O15379 428 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 SNX16P57768 344 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 COG7P83436 770 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 PLOD1Q02809 727 aaPredicted RBP13.7□□□□□ -0.22
SKA3-202ENST00000314759 HSP90AA5PQ58FG0 334 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 ZFP1Q6P2D0 407 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 RIOX2Q8IUF8 465 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
SKA3-202ENST00000314759 ADCY4Q8NFM4 1077 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 TMIGD2Q96BF3 282 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 KLRG1Q96E93 195 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 ZFRQ96KR1 1074 aaKnown RBP13.7□□□□□ -0.22
SKA3-202ENST00000314759 PKP2Q99959 881 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 FZD10Q9ULW2 581 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 STX16-NPEPL1H3BU86 382 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 HBP1O60381 514 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 MPOP05164 745 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
SKA3-202ENST00000314759 IFRD2Q12894 506 aaPredicted RBP13.7□□□□□ -0.22
SKA3-202ENST00000314759 APOFQ13790 326 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 TMEM198Q66K66 360 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 TMEM135Q86UB9 458 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 SLC7A14Q8TBB6 771 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 GRIN3AQ8TCU5 1115 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 DIS3LQ8TF46 1054 aaKnown RBP13.7□□□□□ -0.22
SKA3-202ENST00000314759 NUF2Q9BZD4 464 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 LRRC40Q9H9A6 602 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 TIMMDC1Q9NPL8 285 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 PLK2Q9NYY3 685 aa13.7□□□□□ -0.22
SKA3-202ENST00000314759 KCNK1O00180 336 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 GRID2O43424 1007 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 PGK2P07205 417 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 TFEBP19484 476 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 GMPSP49915 693 aaPredicted RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 RPL14P50914 215 aaKnown RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 SULT2A1Q06520 285 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 PPIDQ08752 370 aaKnown RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 ARL13AQ5H913 290 aaPredicted RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 SEL1L3Q68CR1 1132 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 PID1Q7Z2X4 250 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 LZICQ8WZA0 190 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 IRGQQ8WZA9 623 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 MFSD3Q96ES6 412 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 SMARCAD1Q9H4L7 1026 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 IGSF9Q9P2J2 1179 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 RAP2CQ9Y3L5 183 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 TK2O00142 265 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 ENO3P13929 434 aaPredicted RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 NELFEP18615 380 aaKnown RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 ADORA2BP29275 332 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 PPARGP37231 505 aaPredicted RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 PGGT1BP53609 377 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 PGAM4Q8N0Y7 254 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 CPSF7Q8N684 471 aaKnown RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 CATSPER1Q8NEC5 780 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 SREK1Q8WXA9 508 aaKnown RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 KLHL32Q96NJ5 620 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 DRC3Q9H069 523 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 ZNF385DQ9H6B1 395 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 WDR41Q9HAD4 459 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
SKA3-202ENST00000314759 VANGL2Q9ULK5 521 aa13.69□□□□□ -0.22
SKA3-202ENST00000314759 MAGED2Q9UNF1 606 aaPredicted RBP13.69□□□□□ -0.22
SKA3-202ENST00000314759 PRSS51A0A1B0GVH4 220 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 H2AFYO75367 372 aaKnown RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 VTNP04004 478 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 CAPNS1P04632 268 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 JUNP05412 331 aaKnown RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 SBK3P0C264 359 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 FAM58BPP0C7Q3 252 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 GRIA4P48058 902 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 PITX1P78337 314 aaPredicted RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 STRADAQ7RTN6 431 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 RNF139Q8WU17 664 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 NDRG1Q92597 394 aaKnown RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 ACE2Q9BYF1 805 aaPredicted RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 SPATC1LQ9H0A9 340 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 ARHGEF38Q9NXL2 777 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 RCOR3Q9P2K3 495 aaPredicted RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 ZDHHC2Q9UIJ5 367 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 PCNTO95613 3336 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 ARHGAP10A1A4S6 786 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 BCAS2O75934 225 aaPredicted RBP13.68□□□□□ -0.22
SKA3-202ENST00000314759 PIGNO95427 931 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 ME2P23368 584 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 SLC26A2P50443 739 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 POU5F1BQ06416 359 aa13.68□□□□□ -0.22
SKA3-202ENST00000314759 CYTH1Q15438 398 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms