RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 WNT3AP56704 352 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 WNT7BP56706 349 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 CA9Q16790 459 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 TTMPQ5BVD1 217 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 TXNRD3NBQ6F5E7 133 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 C11orf49Q9H6J7 331 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 VRTNQ9H8Y1 702 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 UTP6Q9NYH9 597 aaKnown RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 PLK2Q9NYY3 685 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ZNF623O75123 536 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 KLHL2O95198 593 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 GRK2P25098 689 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 PGM1P36871 562 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 TM4SF4P48230 202 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 MTFR1Q15390 333 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ZNF697Q5TEC3 545 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 SPATA24Q86W54 205 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 C7orf61Q8IZ16 206 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 CMASQ8NFW8 434 aaPredicted RBP13.92□□□□□ -0.18
DDX54-202ENST00000314045 APOPT1Q96IL0 206 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 Q9H521 79 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ACSS3Q9H6R3 686 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 RGS18Q9NS28 235 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 SNX10Q9Y5X0 201 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
DDX54-202ENST00000314045 A0A1B0GUL6 1792 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 BCLAF3A2AJT9 711 aaKnown RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 SYNCRIPO60506 623 aaKnown RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 TMCC1O94876 653 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 IL1R2P27930 398 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 SERPINA4P29622 427 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 C12orf50Q8NA57 414 aaPredicted RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 GLOD4Q9HC38 313 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 WWOXQ9NZC7 414 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDX54-202ENST00000314045 CDYLQ9Y232 598 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 A8MX80 341 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 LUC7L3O95232 432 aaKnown RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 PIRTP0C851 137 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 TCF4P15884 667 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 ITGA9Q13797 1035 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 TRIM60Q495X7 471 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 SGO1Q5FBB7 561 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 CES5AQ6NT32 575 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 CTU1Q7Z7A3 348 aaKnown RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 FBXW11Q9UKB1 542 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 E9PAM4 449 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 CLDN11O75508 207 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 TSHRP16473 764 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 RHOQP17081 205 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 SCNN1AP37088 669 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 SOX4Q06945 474 aaPredicted RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 RFWD3Q6PCD5 774 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 BBS2Q9BXC9 721 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 ANGPTL2Q9UKU9 493 aa13.91□□□□□ -0.18
DDX54-202ENST00000314045 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
DDX54-202ENST00000314045 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 TBC1D3BA6NDS4 549 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 NCF1BA6NI72 391 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 NCF1CA8MVU1 366 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 NOL3O60936 208 aaKnown RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 SKAP2O75563 359 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 NCF1P14598 390 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 ADRA1DP25100 572 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 SNX31Q8N9S9 440 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 CPT1BQ92523 772 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 NCKIPSDQ9NZQ3 722 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 CFAP97Q9P2B7 532 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 DNAJC16Q9Y2G8 782 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 PHGDHO43175 533 aaKnown RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 MPOP05164 745 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 IGFBP4P22692 258 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 OGDHQ02218 1023 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 NAB1Q13506 487 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 GRAMD1BQ3KR37 738 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 ADCK2Q7Z695 626 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 MYO1HQ8N1T3 1032 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 NEUROG2Q9H2A3 272 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 TLE6Q9H808 572 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 SLC28A3Q9HAS3 691 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 NDE1Q9NXR1 346 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 CRYL1Q9Y2S2 319 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 ABHD14A-ACY1A0A1B0GW23 586 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 KCNU1A8MYU2 1149 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 B2RBV5 119 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 DNM1LO00429 736 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 CHRNA1P02708 482 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 TACR2P21452 398 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 YBEYP58557 167 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 POLR2LP62875 67 aaKnown RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 GPR158Q5T848 1215 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms