RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 SLC7A14Q8TBB6 771 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 GRIN3AQ8TCU5 1115 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 JADE3Q92613 823 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 CENPIQ92674 756 aaPredicted RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 VPS39Q96JC1 886 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 KLHL32Q96NJ5 620 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 OSMRQ99650 979 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 CPNE1Q99829 537 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 GMPR2Q9P2T1 348 aaKnown RBP16.91■□□□□ 0.3
SSH3-201ENST00000308127 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
SSH3-201ENST00000308127 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 HNRNPRO43390 633 aaKnown RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 TFAP2AP05549 437 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 PABPC4LP0CB38 370 aaKnown RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 SRGAP2BP0DMP2 458 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 ERCC2P18074 760 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 PTPN3P26045 913 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 LIMK2P53671 638 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 MPP3Q13368 585 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 GK5Q6ZS86 529 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 OTOP3Q7RTS5 596 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 EGFL6Q8IUX8 553 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 DENND6AQ8IWF6 608 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 KYQ8NBH2 561 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 VCX3BQ9H321 246 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 ATXN3LQ9H3M9 355 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 VCX3AQ9NNX9 186 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 CLPTM1O96005 669 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.3
SSH3-201ENST00000308127 NFKB1P19838 968 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 RALGDSQ12967 914 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 LSAMPQ13449 338 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 BNC2Q6ZN30 1099 aaPredicted RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 AMIGO2Q86SJ2 522 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 RNF135Q8IUD6 432 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 SPATA22Q8NHS9 363 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 RTKNQ9BST9 563 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 MLPHQ9BV36 600 aaPredicted RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 FTHL17Q9BXU8 183 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 ILKAPQ9H0C8 392 aaPredicted RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 CYP4F12Q9HCS2 524 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 SETD4Q9NVD3 440 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 ADA2Q9NZK5 511 aa16.9■□□□□ 0.3
SSH3-201ENST00000308127 GNEQ9Y223 722 aaKnown RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 RUVBL2Q9Y230 463 aaKnown RBP16.9■□□□□ 0.3
SSH3-201ENST00000308127 TFEBP19484 476 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 MPP1Q00013 466 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 MYBPC1Q00872 1141 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 USP10Q14694 798 aaKnown RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 GRTP1Q5TC63 336 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 OGFRL1Q5TC84 451 aaPredicted RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 CATSPER4Q7RTX7 472 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 ANKRD52Q8NB46 1076 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 EDEM1Q92611 657 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 CAMKK2Q96RR4 588 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 LIN28AQ9H9Z2 209 aaKnown RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 BFARQ9NZS9 450 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 PSMD13Q9UNM6 376 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 TIMM13Q9Y5L4 95 aaPredicted RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 NRP1O14786 923 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 RECQL4O94761 1208 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 SBK3P0C264 359 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 MLNP12872 115 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 ALOX15P16050 662 aaPredicted RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 TSPAN8P19075 237 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 GLDCP23378 1020 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 RPS12P25398 132 aaKnown RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 CD68P34810 354 aaPredicted RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 MATKP42679 507 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 PLK1P53350 603 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 BCAT1P54687 386 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 CYLC2Q14093 348 aaPredicted RBP16.89■□□□□ 0.29
SSH3-201ENST00000308127 SEL1L3Q68CR1 1132 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 CYP2R1Q6VVX0 501 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 ATP6V1E2Q96A05 226 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 HIC2Q96JB3 615 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 FERMT1Q9BQL6 677 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 SNX25Q9H3E2 840 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 LRRC40Q9H9A6 602 aa16.89■□□□□ 0.29
SSH3-201ENST00000308127 VILLO15195 856 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 GRID2O43424 1007 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 PCSK6P29122 969 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 MAP3K7CLP57077 242 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 ARHGAP1Q07960 439 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 TTLL4Q14679 1199 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 POU6F1Q14863 301 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 ARHGAP18Q8N392 663 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 FAM110BQ8TC76 370 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 OPTNQ96CV9 577 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 SIKE1Q9BRV8 207 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 STN1Q9H668 368 aaKnown RBP16.88■□□□□ 0.29
SSH3-201ENST00000308127 WDR41Q9HAD4 459 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 STK39Q9UEW8 545 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 PAPPA2Q9BXP8 1791 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 JCHAINP01591 159 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 HOXA11P31270 313 aaPredicted RBP16.88■□□□□ 0.29
SSH3-201ENST00000308127 SOX4Q06945 474 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms