RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 PCDHGC4Q9Y5F7 938 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 USP3Q9Y6I4 520 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 COL6A3P12111 3177 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ALOX15BO15296 676 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 KLKB1P03952 638 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 HLA-DQB2P05538 268 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 MLLT6P55198 1093 aaPredicted RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 DPYSQ14117 519 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ZNF460Q14592 562 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 CNGA3Q16281 694 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 MFSD5Q6N075 450 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ZNF419Q96HQ0 510 aaPredicted RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 CYTH2Q99418 400 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 NRG2O14511 850 aaPredicted RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 TBL1XO60907 577 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 SLC6A4P31645 630 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 GEMIN4P57678 1058 aaKnown RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 CDH18Q13634 790 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 MARC1Q5VT66 337 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 LVRNQ6Q4G3 990 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 GPATCH11Q8N954 259 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 ARMC2Q8NEN0 867 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 SEMA3CQ99985 751 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
TTC17-202ENST00000299240 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
TTC17-202ENST00000299240 K7ERQ8 282 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 FPGSQ05932 587 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 TEX44Q53QW1 395 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 FAM133BQ5BKY9 247 aaKnown RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 NLRP14Q86W24 1093 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 LRRC6Q86X45 466 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 NDUFAF2Q8N183 169 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 ZSCAN18Q8TBC5 510 aaPredicted RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 TXLNGYQ9BZA5 131 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 ZYG11BQ9C0D3 744 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 CFAP97Q9P2B7 532 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 SCML2Q9UQR0 700 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 C2orf71A6NGG8 1288 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 EBAG9O00559 213 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.356e-6■■■■□ 25.8
TTC17-202ENST00000299240 LPXNO60711 386 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 SOD2P04179 222 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 CD68P34810 354 aaPredicted RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 NR2C2P49116 596 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 PRPSAP1Q14558 356 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 STAT4Q14765 748 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 FBXO48Q5FWF7 155 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 ZFYVE19Q96K21 471 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 CABS1Q96KC9 395 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 SMOC2Q9H3U7 446 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 RABGEF1Q9UJ41 708 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 CHKBQ9Y259 395 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 BCLAF3A2AJT9 711 aaKnown RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 PHGDHO43175 533 aaKnown RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 TACR2P21452 398 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 NMBRP28336 390 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 PBX2P40425 430 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 KCNJ11Q14654 390 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 ATXN7L2Q5T6C5 722 aaPredicted RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 TCP10LQ8TDR4 215 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 RUBCNQ92622 972 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 VWCEQ96DN2 955 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 NDNQ99608 321 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 TNKS2Q9H2K2 1166 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 SARS2Q9NP81 518 aaKnown RBP12.86□□□□□ -0.35
TTC17-202ENST00000299240 SLC39A10Q9ULF5 831 aa12.86□□□□□ -0.35
TTC17-202ENST00000299240 ZNF840PA6NDX5 716 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 SDR42E2A6NKP2 422 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 RTN3O95197 1032 aaPredicted RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 EPCAMP16422 314 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 SLC11A2P49281 568 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 CSE1LP55060 971 aaKnown RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 SLC1A5Q15758 541 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 RNF219Q5W0B1 726 aaPredicted RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 TSPAN18Q96SJ8 248 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 NCAPGQ9BPX3 1015 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 UXTQ9UBK9 157 aaPredicted RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 FCF1Q9Y324 198 aaKnown RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 SH3BP1Q9Y3L3 701 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 HCFC2Q9Y5Z7 792 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 ABHD14A-ACY1A0A1B0GW23 586 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 C1RP00736 705 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 RHOCP08134 193 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 NUDT17P0C025 328 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 LIG3P49916 1009 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 DENND6AQ8IWF6 608 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 TNS4Q8IZW8 715 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 SLC39A11Q8N1S5 342 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 MRPS31Q92665 395 aaKnown RBP12.85□□□□□ -0.35
TTC17-202ENST00000299240 SLCO2A1Q92959 643 aa12.85□□□□□ -0.35
TTC17-202ENST00000299240 NT5C3BQ969T7 300 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms