RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ATG16L2Q8NAA4 619 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 OR6Y1Q8NGX8 325 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 POP5Q969H6 163 aaKnown RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 MAML3Q96JK9 1138 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 CD3EAPO15446 510 aaKnown RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 MLH1P40692 756 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 MAP1SQ66K74 1059 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 USP45Q70EL2 814 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 FAM126BQ8IXS8 530 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 SERAC1Q96JX3 654 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 EBNA1BP2Q99848 306 aaKnown RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 SEC22BO75396 215 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 LBPP18428 481 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ALDH6A1Q02252 535 aaKnown RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ZCCHC8Q6NZY4 707 aaKnown RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 NET1Q7Z628 596 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PIGZQ86VD9 579 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 PHACTR4Q8IZ21 702 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 AADATQ8N5Z0 425 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 MAGEC3Q8TD91 643 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 HGH1Q9BTY7 390 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 C2orf49Q9BVC5 232 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-201ENST00000292478 ZYG11BQ9C0D3 744 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 OPTCQ9UBM4 332 aa12.99□□□□□ -0.33
PTCD1-201ENST00000292478 FAM220BPB1ANY3 271 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 TSPAN3O60637 253 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CCDC159P0C7I6 412 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 MATKP42679 507 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CAPZA2P47755 286 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 FKBP1BP68106 108 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 TRIM16LQ309B1 348 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 OR52K1Q8NGK4 314 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ADPRHL2Q9NX46 363 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 VPS51Q9UID3 782 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 PAIP2BQ9ULR5 123 aaKnown RBP12.98□□□□□ -0.33
PTCD1-201ENST00000292478 C15orf41Q9Y2V0 281 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 COPG1Q9Y678 874 aaKnown RBP12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ZBTB14O43829 449 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ERVK-10P10266 1014 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 FGFR1P11362 822 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 RAG1P15918 1043 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 SCNN1GP51170 649 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CACNA2D1P54289 1103 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CCDC92Q53HC0 331 aaPredicted RBP12.98□□□□□ -0.33
PTCD1-201ENST00000292478 MTSS1LQ765P7 747 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ZNF446Q9NWS9 450 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 COPG2Q9UBF2 871 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CAB39Q9Y376 341 aaPredicted RBP12.98□□□□□ -0.33
PTCD1-201ENST00000292478 SMIM22K7EJ46 135 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 KPNA5O15131 536 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 B4GALT4O60513 344 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 SHBGP04278 402 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 KLRC2P26717 231 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 EPS8Q12929 822 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 C1DQ13901 141 aaKnown RBP12.98□□□□□ -0.33
PTCD1-201ENST00000292478 SQLEQ14534 574 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 STARD3Q14849 445 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ECM1Q16610 540 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 AFTPHQ6ULP2 937 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 NPNTQ6UXI9 565 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ABHD15Q6UXT9 468 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
PTCD1-201ENST00000292478 APOL4Q9BPW4 351 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 ATXN3LQ9H3M9 355 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CNGB3Q9NQW8 809 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 RPS6KB2Q9UBS0 482 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 DCXO43602 365 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 STXBP5Q5T5C0 1151 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 PGLYRP2Q96PD5 576 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 CDRT15Q96T59 188 aa12.98□□□□□ -0.33
PTCD1-201ENST00000292478 WTIPA6NIX2 430 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 FMO4P31512 558 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 HPCAL1P37235 193 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 MAP2K5Q13163 448 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 BRMS1LQ5PSV4 323 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 DEFB128Q7Z7B8 93 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 OR5B17Q8NGF7 314 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 HELQQ8TDG4 1101 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 BBS2Q9BXC9 721 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TMEM216Q9P0N5 145 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 RCOR3Q9P2K3 495 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 ADAM30Q9UKF2 790 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 KLHL20Q9Y2M5 609 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 UNC5CO95185 931 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 CCNB1P14635 433 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 TNFSF9P41273 254 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 ELF3P78545 371 aaPredicted RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
PTCD1-201ENST00000292478 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
PTCD1-201ENST00000292478 PAGE2BQ5JRK9 111 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms