RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 PDPK2PQ6A1A2 396 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 LMNTD2Q8IXW0 634 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 OR6Y1Q8NGX8 325 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 ZSCAN18Q8TBC5 510 aaPredicted RBP20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 HASPINQ8TF76 798 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 VPS39Q96JC1 886 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 TEKT5Q96M29 485 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 RTP3Q9BQQ7 232 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 KATNAL1Q9BW62 490 aa20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 STN1Q9H668 368 aaKnown RBP20.34■□□□□ 0.85
SCUBE1-201ENST00000290460 HOXC8P31273 242 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 ITPRIPL1Q6GPH6 555 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 RWDD4Q6NW29 188 aaKnown RBP20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 CLEC14AQ86T13 490 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 PHTF2Q8N3S3 785 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 CNTD1Q8N815 330 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 SPATA22Q8NHS9 363 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 UCMAQ8WVF2 138 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 SPDL1Q96EA4 605 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 SIK2Q9H0K1 926 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 TRHDEQ9UKU6 1024 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 CDH9Q9ULB4 789 aa20.33■□□□□ 0.85
SCUBE1-201ENST00000290460 LIN7AO14910 233 aaPredicted RBP20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 KLHL2O95198 593 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 FAM163BP0C2L3 166 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 GNAT1P11488 350 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 SERPINB6P35237 376 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 AGMOQ6ZNB7 445 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 ZNF419Q96HQ0 510 aaPredicted RBP20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 COG4Q9H9E3 785 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 ZNF212Q9UDV6 495 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 SLC39A10Q9ULF5 831 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 PCDHB12Q9Y5F1 795 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 PTCH2Q9Y6C5 1203 aa20.33■□□□□ 0.84
SCUBE1-201ENST00000290460 LOC100653049A0A140TA62 436 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 ERI2A8K979 691 aaKnown RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 DFFAO00273 331 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 ZMPSTE24O75844 475 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 KRT34O76011 436 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 HSPA4LO95757 839 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 ALOX15P16050 662 aaPredicted RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 TUBP50607 506 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 COPAP53621 1224 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 ITGA7Q13683 1181 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 C6orf163Q5TEZ5 329 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 CAPRIN2Q6IMN6 1127 aaKnown RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 MAPK15Q8TD08 544 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 DPF3Q92784 378 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 FAM136AQ96C01 138 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 TTC1Q99614 292 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 APBA2Q99767 749 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 IL22Q9GZX6 179 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 CYP4F11Q9HBI6 524 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 TMLHEQ9NVH6 421 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 E9PBE3 544 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 M0QZ92 97 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 TK2O00142 265 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 MTSS1O43312 755 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 KLHL41O60662 606 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 CELF2O95319 508 aaKnown RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 MT-CYBP00156 380 aaPredicted RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 F9P00740 461 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 ANPEPP15144 967 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 GRM3Q14832 879 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 SLC9B1Q4ZJI4 515 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 MYLK4Q86YV6 388 aaPredicted RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 SCAMP5Q8TAC9 235 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 TMEM209Q96SK2 561 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 MCMBPQ9BTE3 642 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 NMRAL1Q9HBL8 299 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 PPM1HQ9ULR3 514 aa20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 CORO1CQ9ULV4 474 aaPredicted RBP20.32■□□□□ 0.84
SCUBE1-201ENST00000290460 PHGDHO43175 533 aaKnown RBP20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 DCXO43602 365 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 AVPR1AP37288 418 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 CCR10P46092 362 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 BRCC3P46736 316 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 NPY2RP49146 381 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 CDK7P50613 346 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 EPHB1P54762 984 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 UPP1Q16831 310 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 INTS6LQ5JSJ4 861 aaKnown RBP20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 PM20D1Q6GTS8 502 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 TAF2Q6P1X5 1199 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 DQX1Q8TE96 717 aaKnown RBP20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 PPP1R36Q96LQ0 422 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 BRD8Q9H0E9 1235 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 DONSONQ9NYP3 566 aa20.31■□□□□ 0.84
SCUBE1-201ENST00000290460 A6NHS1 94 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 ZBTB14O43829 449 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 PDE5AO76074 875 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 POMCP01189 267 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 CHRNA1P02708 482 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 MPOP05164 745 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 CHRNGP07510 517 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 CDH17Q12864 832 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 RAPH1Q70E73 1250 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 EFCAB3Q8N7B9 438 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 PPFIBP2Q8ND30 876 aa20.3■□□□□ 0.84
SCUBE1-201ENST00000290460 CDH19Q9H159 772 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms