RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IPO11Q9UI26 975 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 BRWD1Q9NSI6 2320 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 NEDD8-MDP1E9PL57 170 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 ECI2O75521 394 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 SEC31AO94979 1220 aaKnown RBP19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 ETS1P14921 441 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 PSMC3P17980 439 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 IVDP26440 423 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 ACVRL1P37023 503 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 DHCR24Q15392 516 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 MAP9Q49MG5 647 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 RNF219Q5W0B1 726 aaPredicted RBP19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 TIGD7Q6NT04 549 aaPredicted RBP19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 WFDC5Q8TCV5 224 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 ZFYVE19Q96K21 471 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 KXD1Q9BQD3 176 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 PLA2G2FQ9BZM2 168 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 SNX24Q9Y343 169 aa19.34■□□□□ 0.69
PDLIM3-202ENST00000284770 C5orf60A6NFR6 353 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 KCNK1O00180 336 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 CYP17A1P05093 508 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 ZSCAN5DPP0CG00 497 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 TYRP14679 529 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 ETFBP38117 255 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 NRLP54845 237 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 PDGFRLQ15198 375 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 P3H1Q32P28 736 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 ZNF354CQ86Y25 554 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 OR7D4Q8NG98 312 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 ATP2A3Q93084 1043 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 FATE1Q969F0 183 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 MUC3BQ9H195 1237 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 NEUROG2Q9H2A3 272 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 ASIC3Q9UHC3 531 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 CLEC4EQ9ULY5 219 aa19.33■□□□□ 0.68
PDLIM3-202ENST00000284770 C5orf42Q9H799 3197 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 MATN3O15232 486 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 GCATO75600 419 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 STK10O94804 968 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 NFATC1O95644 943 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ADH1CP00326 375 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ACTN2P35609 894 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 OXCT1P55809 520 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 WASHC5Q12768 1159 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 IL31Q6EBC2 164 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 YAF2Q8IY57 180 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ZNF557Q8N988 423 aaPredicted RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 FEM1AQ9BSK4 669 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ACE2Q9BYF1 805 aaPredicted RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 EBF3Q9H4W6 596 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ZDHHC18Q9NUE0 388 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 SEPT10Q9P0V9 454 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 KIAA1522Q9P206 1035 aaPredicted RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 SPTBN5Q9NRC6 3674 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ANHXE9PGG2 379 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 J3KR12 359 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 RNF103O00237 685 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 TP73O15350 636 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ARSAP15289 507 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 SP100P23497 879 aaPredicted RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 RPL22P35268 128 aaKnown RBP19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 IL10RBQ08334 325 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ZDHHC24Q6UX98 284 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 VAT1Q99536 393 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 SPON2Q9BUD6 331 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 SP110Q9HB58 689 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 ATP13A1Q9HD20 1204 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 OR51B4Q9Y5P0 310 aa19.32■□□□□ 0.68
PDLIM3-202ENST00000284770 EYSQ5T1H1 3165 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 KDELR3O43731 214 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 PEX11BO96011 259 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 ADH5P11766 374 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 CCNB1P14635 433 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 PTPN3P26045 913 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 MZF1P28698 734 aaPredicted RBP19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 ADCY8P40145 1251 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 CSKP41240 450 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 VPS41P49754 854 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 GAD2Q05329 585 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 HTR4Q13639 388 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 GRM2Q14416 872 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 HLTFQ14527 1009 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 ANKRD20A2Q5SQ80 823 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 ANKRD20A1Q5TYW2 823 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 ANKRD20A3Q5VUR7 823 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 EMBQ6PCB8 327 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 CCDC110Q8TBZ0 833 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 ALG14Q96F25 216 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 RPP25Q9BUL9 199 aaKnown RBP19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 SLC2A11Q9BYW1 496 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 PAK5Q9P286 719 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 HPCAL4Q9UM19 191 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 NUMBLQ9Y6R0 609 aa19.31■□□□□ 0.68
PDLIM3-202ENST00000284770 A0A0A0MRY4 1105 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 CHADO15335 359 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 HOXC11O43248 304 aaPredicted RBP19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 PRAMEF11O60813 436 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 FAM153BP0C7A2 387 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 IFI35P80217 286 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms