RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 MFSD3Q96ES6 412 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 CCDC106Q9BWC9 280 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 CAB39LQ9H9S4 337 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 TAGLN3Q9UI15 199 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ADAM28Q9UKQ2 775 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 MRPL42Q9Y6G3 142 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 PTPRDP23468 1912 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ZCWPW2A0A1B0GU75 182 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 PRR5-ARHGAP8B1AHC4 643 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SPECC1L-ADORA2AF8WAN1 911 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 MGEA5O60502 916 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 DUSP11O75319 330 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ZNF189O75820 626 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 USP1O94782 785 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 LMNAP02545 664 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SRGAP2BP0DMP2 458 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SYN1P17600 705 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 CD52P31358 61 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 SPRP35270 261 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 CCNG1P51959 295 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 IRF9Q00978 393 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 NAA25Q14CX7 972 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 HSP90AA5PQ58FG0 334 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ACSBG2Q5FVE4 666 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 METTL23Q86XA0 190 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 WDR75Q8IWA0 830 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 PIWIL2Q8TC59 973 aaKnown RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 BRD8Q9H0E9 1235 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 CXorf56Q9H5V9 222 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 C20orf96Q9NUD7 363 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-201ENST00000266679 PNPOQ9NVS9 261 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
CPSF6-201ENST00000266679 MEI4A8MW99 385 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 DFFAO00273 331 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 MTSS1O43312 755 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 B3GAT3O94766 335 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
CPSF6-201ENST00000266679 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
CPSF6-201ENST00000266679 LIMK2P53671 638 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 MXRA7P84157 204 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 MGAT3Q09327 533 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 ITGA9Q13797 1035 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 RCN1Q15293 331 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 INSCQ1MX18 579 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 ARHGAP36Q6ZRI8 547 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 OTOP3Q7RTS5 596 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 TMEM135Q86UB9 458 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 KCNMB4Q86W47 210 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 PLD6Q8N2A8 252 aaKnown RBP13.15□□□□□ -0.3
CPSF6-201ENST00000266679 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
CPSF6-201ENST00000266679 PPP4R1Q8TF05 950 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 WDR60Q8WVS4 1066 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 IRGQQ8WZA9 623 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 FAM161BQ96MY7 647 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 SIK2Q9H0K1 926 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 DMAP1Q9NPF5 467 aaPredicted RBP13.15□□□□□ -0.3
CPSF6-201ENST00000266679 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 IARS2Q9NSE4 1012 aaKnown RBP13.15□□□□□ -0.3
CPSF6-201ENST00000266679 COPG2Q9UBF2 871 aa13.15□□□□□ -0.3
CPSF6-201ENST00000266679 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 SERPINA6P08185 405 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 RALBP11234 206 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 NMBRP28336 390 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 ARRB2P32121 409 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 THPOP40225 353 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 MAGEA12P43365 314 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 PTDSS1P48651 473 aaKnown RBP13.15□□□□□ -0.31
CPSF6-201ENST00000266679 DLG2Q15700 870 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 CCDC6Q16204 474 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 FSTL4Q6MZW2 842 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 MAVSQ7Z434 540 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 OR10T2Q8NGX3 314 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 TEKT5Q96M29 485 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 SORT1Q99523 831 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.31
CPSF6-201ENST00000266679 DCLRE1BQ9H816 532 aa13.15□□□□□ -0.31
CPSF6-201ENST00000266679 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 ERI2A8K979 691 aaKnown RBP13.14□□□□□ -0.31
CPSF6-201ENST00000266679 GPR182O15218 404 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 KPNA6O60684 536 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 IGHA2P01877 340 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 CYBAP13498 195 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 CPA3P15088 417 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 CDC25CP30307 473 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 ABCE1P61221 599 aaKnown RBP13.14□□□□□ -0.31
CPSF6-201ENST00000266679 MPP3Q13368 585 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 TUBB3Q13509 450 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms